RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 OR51L1Q8NGJ5 315 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 ST7LQ8TDW4 575 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 GTF3AQ92664 365 aaKnown RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 FBXO32Q969P5 355 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 RAD51AP1Q96B01 352 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 SEPT5Q99719 369 aaPredicted RBP13.62□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF350Q9GZX5 532 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 P2RY12Q9H244 342 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 DSPPQ9NZW4 1301 aa13.62□□□□□ -0.23
PTPRA-201ENST00000216877 OR2M5A3KFT3 312 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 TNFRSF10BO14763 440 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 THBS2P35442 1172 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 FAM110CQ1W6H9 321 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF697Q5TEC3 545 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 LRRC70Q7Z2Q7 622 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 ETFBKMTQ8IXQ9 262 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 S100A16Q96FQ6 103 aaKnown RBP13.61□□□□□ -0.23
PTPRA-201ENST00000216877 TMEM41AQ96HV5 264 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 ADAM2Q99965 735 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 FCF1Q9Y324 198 aaKnown RBP13.61□□□□□ -0.23
PTPRA-201ENST00000216877 A0A0B4J2A0 478 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 C13orf42A0A1B0GVH6 325 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 EEF1E1-BLOC1S5C9J1V9 151 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 PTGESO14684 152 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF44P15621 663 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 CCR7P32248 378 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 RNF4P78317 190 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 MICBQ29980 383 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 PRICKLE2Q7Z3G6 844 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 FAM98AQ8NCA5 519 aaKnown RBP13.61□□□□□ -0.23
PTPRA-201ENST00000216877 CASTOR1Q8WTX7 329 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 SHPKQ9UHJ6 478 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 LTBP3Q9NS15 1303 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 TIA1P31483 386 aaKnown RBP eCLIP13.61□□□□□ -0.23
PTPRA-201ENST00000216877 RNF144AP50876 292 aaPredicted RBP13.61□□□□□ -0.23
PTPRA-201ENST00000216877 NFATC2Q13469 925 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 SCGB2B2Q4G0G5 96 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 PIP5KL1Q5T9C9 394 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 KRT77Q7Z794 578 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 TMEM86AQ8N2M4 240 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF561Q8N587 486 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 OR6T1Q8NGN1 323 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 RAB3CQ96E17 227 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 SAMD8Q96LT4 415 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 TRIB3Q96RU7 358 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 CHST6Q9GZX3 395 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 CHST8Q9H2A9 424 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 SYNDIG1Q9H7V2 258 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 IL17CQ9P0M4 197 aa13.61□□□□□ -0.23
PTPRA-201ENST00000216877 A0A1B0GTQ1 180 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 RB1P06400 928 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 FAUP35544 74 aaKnown RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 YBEYP58557 167 aaPredicted RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ECH1Q13011 328 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 TEAD2Q15562 447 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ODF4Q2M2E3 257 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF311Q5JNZ3 666 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 KCTD9Q7L273 389 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 THOC6Q86W42 341 aaKnown RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 KLHDC9Q8NEP7 349 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 HINT3Q9NQE9 182 aaKnown RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 CD84Q9UIB8 345 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ALPK2Q86TB3 2170 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 A0A0G2JN53 185 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 RNASET2O00584 256 aaKnown RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 RBBP9O75884 186 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 CERS1P27544 350 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 PPP2R1BP30154 601 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 IFNGR2P38484 337 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ARHGAP1Q07960 439 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 GLB1LQ6UWU2 654 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 TGIF2LXQ8IUE1 241 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 VRK3Q8IV63 474 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ARMC10Q8N2F6 343 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 SYNPRQ8TBG9 265 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 OR14A2Q96R54 314 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 TMPRSS13Q9BYE2 586 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ZFP37Q9Y6Q3 630 aaPredicted RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 TMEM82A0PJX8 343 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 C5orf52A6NGY3 159 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ACOD1A6NK06 481 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 INHAP05111 366 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 IL3P08700 152 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 CD80P33681 288 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 SOX2P48431 317 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 F2RL1P55085 397 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF763Q0D2J5 394 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 ZNF177Q13360 481 aaPredicted RBP13.6□□□□□ -0.23
PTPRA-201ENST00000216877 CDPF1Q6NVV7 123 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 FAM24BQ8N5W8 94 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 OR51S1Q8NGJ8 323 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 WBP1LQ9NX94 342 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 PCDHGA1Q9Y5H4 931 aa13.6□□□□□ -0.23
PTPRA-201ENST00000216877 OR2AG2A6NM03 316 aa13.59□□□□□ -0.23
PTPRA-201ENST00000216877 RTCAO00442 366 aaKnown RBP13.59□□□□□ -0.23
PTPRA-201ENST00000216877 VEGFDO43915 354 aa13.59□□□□□ -0.23
PTPRA-201ENST00000216877 SPI1P17947 270 aa13.59□□□□□ -0.23
PTPRA-201ENST00000216877 CD22P20273 847 aa13.59□□□□□ -0.23
PTPRA-201ENST00000216877 CBFBQ13951 182 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms