RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 FLRT3Q9NZU0 649 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 USP36Q9P275 1121 aaKnown RBP12.27□□□□□ -0.45
SRP54-201ENST00000216774 ZNF222Q9UK12 451 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 MGAT4AQ9UM21 535 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 SPATA2Q9UM82 520 aa12.27□□□□□ -0.45
SRP54-201ENST00000216774 LOC105369274A0A096LPK9 316 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 A0A1B0GVI7 797 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 GXYLT2A0PJZ3 443 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 ZNF860A6NHJ4 632 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 NKX2-2O95096 273 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 GYPBP06028 91 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 SIRPAP78324 504 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 DGCR2P98153 550 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 EXOSC7Q15024 291 aaKnown RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 ESCO2Q56NI9 601 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 PRRT3Q5FWE3 981 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 RPL22L1Q6P5R6 122 aaKnown RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 FGD2Q7Z6J4 655 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 OR4N4Q8N0Y3 316 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 LSMEM1Q8N8F7 131 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 OR8H1Q8NGG4 311 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 OR13C5Q8NGS8 318 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 SMAP2Q8WU79 429 aaPredicted RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 PHYHIPQ92561 330 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 CNOT9Q92600 299 aaKnown RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 PELI1Q96FA3 418 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 TMEM168Q9H0V1 697 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 UCKL1Q9NWZ5 548 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 CHRNA9Q9UGM1 479 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 ELF5Q9UKW6 265 aaPredicted RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 POM121BA6NF01 834 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 TPOP07202 933 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 SNRPBP14678 240 aaKnown RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 TNFRSF4P43489 277 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 KIR2DL1P43626 348 aaPredicted RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 NFATC4Q14934 902 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 GSG1Q2KHT4 349 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 CDONQ4KMG0 1287 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 TP53I3Q53FA7 332 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 MANEAQ5SRI9 462 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 ENPP7Q6UWV6 458 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 BTN2A1Q7KYR7 527 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 TMEM52Q8NDY8 209 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 DOK4Q8TEW6 326 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 SMIM4Q8WVI0 70 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 HERVK_113Q902F9 699 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 MRPL48Q96GC5 212 aaKnown RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 ZFP3Q96NJ6 502 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 ERMAPQ96PL5 475 aaPredicted RBP12.26□□□□□ -0.45
SRP54-201ENST00000216774 ACTR10Q9NZ32 417 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 EMC3Q9P0I2 261 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 ICAM5Q9UMF0 924 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 CHD9Q3L8U1 2897 aa12.26□□□□□ -0.45
SRP54-201ENST00000216774 A0A1B0GTQ1 180 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 A6NCN8 305 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 H0YGG7 62 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ZNF749O43361 778 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 TFP02787 698 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 NGFRP08138 427 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 H2AFB2P0C5Z0 115 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 TYRP1P17643 537 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ACTR1BP42025 376 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ACAA2P42765 397 aaKnown RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 ACTR1AP61163 376 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ARF3P61204 181 aaPredicted RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 KLF9Q13886 244 aaPredicted RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 ITPRIPL2Q3MIP1 535 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ALG10BQ5I7T1 473 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 UBE2NLQ5JXB2 153 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 TEX261Q6UWH6 196 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 LINC00114Q6XXX2 140 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 LSRQ86X29 649 aaPredicted RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 SLITRK4Q8IW52 837 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 RFLNBQ8N5W9 214 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 OR52E2Q8NGJ4 325 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 OR56B4Q8NH76 319 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 MARVELD3Q96A59 401 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 PLA2G2FQ9BZM2 168 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 NRIP3Q9NQ35 241 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 DNAJB12Q9NXW2 375 aaKnown RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 MRPS2Q9Y399 296 aaKnown RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 U3KQ87 197 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 A0A1W2PQ72 361 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 ZNF879B4DU55 563 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 GPRIN2O60269 458 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 TSC22D2O75157 780 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 TMEM127O75204 238 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 NDUFB2O95178 105 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 CRYZL1O95825 349 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 CT62P0C5K7 136 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 SULT1A3P0DMM9 295 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 SULT1A4P0DMN0 295 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 POLR2CP19387 275 aaPredicted RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 SEC13P55735 322 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 RPS11P62280 158 aaKnown RBP eCLIP12.25□□□□□ -0.45
SRP54-201ENST00000216774 PPP2CBP62714 309 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 PPP2CAP67775 309 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 LGALS3BPQ08380 585 aa12.25□□□□□ -0.45
SRP54-201ENST00000216774 SNTB2Q13425 540 aaKnown RBP12.25□□□□□ -0.45
SRP54-201ENST00000216774 ZSWIM7Q19AV6 140 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms