RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 IMPA1P29218 277 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 PTGER1P34995 402 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 SLC6A11P48066 632 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 SEC61A1P61619 476 aaKnown RBP12.66□□□□□ -0.38
SF3A1-201ENST00000215793 PDE7AQ13946 482 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 IL17RDQ8NFM7 739 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 STK35Q8TDR2 534 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 SORCS2Q96PQ0 1159 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 ELOVL3Q9HB03 270 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 VSX1Q9NZR4 365 aaPredicted RBP12.66□□□□□ -0.38
SF3A1-201ENST00000215793 YY2O15391 372 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 TNFRSF17Q02223 184 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 MBTPS1Q14703 1052 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 GPR19Q15760 415 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 DUSP7Q16829 419 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 LCN10Q6JVE6 187 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 SIMC1Q8NDZ2 872 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 OR5T1Q8NG75 326 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 GIMAP5Q96F15 307 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 MS4A4AQ96JQ5 239 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 ZNF334Q9HCZ1 680 aaPredicted RBP12.66□□□□□ -0.38
SF3A1-201ENST00000215793 TRBV11-1A0A0K0K1C0 115 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 PLSCR5A0PG75 271 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 ADAM12O43184 909 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 GIFP27352 417 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 GJA5P36382 358 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 ZNF136P52737 540 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 SQSTM1Q13501 440 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 OR7E24Q6IFN5 339 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 ZNF585AQ6P3V2 769 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 MEX3BQ6ZN04 569 aaKnown RBP12.66□□□□□ -0.38
SF3A1-201ENST00000215793 CYP4V2Q6ZWL3 525 aaPredicted RBP12.66□□□□□ -0.38
SF3A1-201ENST00000215793 RETREG3Q86VR2 466 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 OR7G1Q8NGA0 311 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 OR4F15Q8NGB8 312 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 MALSU1Q96EH3 234 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 SENP5Q96HI0 755 aaPredicted RBP12.66□□□□□ -0.38
SF3A1-201ENST00000215793 OR2M2Q96R28 347 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 CCNL2Q96S94 520 aaPredicted RBP12.66□□□□□ -0.38
SF3A1-201ENST00000215793 MOKQ9UQ07 419 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 ZBTB42B2RXF5 422 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 DPM1O60762 260 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 DBHP09172 617 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 CDK4P11802 303 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 TACR1P25103 407 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 PLGLAQ15195 96 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 LTB4RQ15722 352 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 PRR18Q8N4B5 295 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 ZNF583Q96ND8 569 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 SDHAF2Q9NX18 166 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 GPR160Q9UJ42 338 aa12.66□□□□□ -0.38
SF3A1-201ENST00000215793 CITO14578 2027 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 GABRR1P24046 479 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 GABRB3P28472 473 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 GABRA5P31644 462 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 PXNP49023 591 aaPredicted RBP12.65□□□□□ -0.38
SF3A1-201ENST00000215793 LTBQ06643 244 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 SELPLGQ14242 412 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 GPR176Q14439 515 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 SLCO4C1Q6ZQN7 724 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 BORCS7Q96B45 105 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 RAB39BQ96DA2 213 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 PTTG3PQ9NZH4 202 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 NUDT7P0C024 238 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 ICAM2P13598 275 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 ZNF44P15621 663 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 TM4SF4P48230 202 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 VASNQ6EMK4 673 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 SBSNQ6UWP8 590 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 SLC38A5Q8WUX1 472 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 ZNF681Q96N22 645 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 BOKQ9UMX3 212 aaPredicted RBP12.65□□□□□ -0.38
SF3A1-201ENST00000215793 OR6C6A6NF89 314 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 GABRPO00591 440 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 IFNA17P01571 189 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 DPY19L4Q7Z388 723 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 SPRED1Q7Z699 444 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 MISPQ8IVT2 679 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 PARP16Q8N5Y8 322 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 OR1J4Q8NGS1 313 aa12.65□□□□□ -0.38
SF3A1-201ENST00000215793 KDM4EB2RXH2 506 aaPredicted RBP12.65□□□□□ -0.39
SF3A1-201ENST00000215793 HLA-DMAP28067 261 aa12.65□□□□□ -0.39
SF3A1-201ENST00000215793 SPOCK1Q08629 439 aa12.65□□□□□ -0.39
SF3A1-201ENST00000215793 C3orf38Q5JPI3 329 aa12.65□□□□□ -0.39
SF3A1-201ENST00000215793 RNF175Q8N4F7 328 aa12.65□□□□□ -0.39
SF3A1-201ENST00000215793 SLC25A31Q9H0C2 315 aa12.65□□□□□ -0.39
SF3A1-201ENST00000215793 EPHX3Q9H6B9 360 aa12.65□□□□□ -0.39
SF3A1-201ENST00000215793 MYH7P12883 1935 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 A8MXE2 369 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 KCNK5O95279 499 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 RPS5P46782 204 aaKnown RBP12.64□□□□□ -0.39
SF3A1-201ENST00000215793 HNRNPFP52597 415 aaKnown RBP12.64□□□□□ -0.39
SF3A1-201ENST00000215793 RAP2BP61225 183 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 EXOSC6Q5RKV6 272 aaKnown RBP12.64□□□□□ -0.39
SF3A1-201ENST00000215793 LSMEM2Q8N112 164 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 BIN3Q9NQY0 253 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 KLK4Q9Y5K2 254 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 SYT5O00445 386 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 OR7A17O14581 309 aa12.64□□□□□ -0.39
SF3A1-201ENST00000215793 PTHP01270 115 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms