RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 SFTPDP35247 375 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 PCYT1AP49585 367 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 PON3Q15166 354 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 SLC25A53Q5H9E4 307 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 PDSS1Q5T2R2 415 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 PPP4R4Q6NUP7 873 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 PODNL1Q6PEZ8 512 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 ESPNLQ6ZVH7 1005 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 ZNF550Q7Z398 422 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 DHDDSQ86SQ9 333 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 CMIPQ8IY22 773 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 LILRA2Q8N149 483 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 OR10D3Q8NH80 312 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 TMEM171Q8WVE6 324 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 TMEM234Q8WY98 164 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 FIG4Q92562 907 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 ZNF524Q96C55 264 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 ZNF317Q96PQ6 595 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 CACYBPQ9HB71 228 aaKnown RBP16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 PAQR5Q9NXK6 330 aaPredicted RBP16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 CORO2BQ9UQ03 480 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 ZNF175Q9Y473 711 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 ABCA1O95477 2261 aa16.9■□□□□ 0.3
TRAPPC6A-201ENST00000006275 TRBV5-3A0A0A0MS03 114 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 A0A0G2JPF8 293 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 A0A0J9YW62 118 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 HNRNPCL2B2RXH8 293 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 HNRNPCL3B7ZW38 293 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 TNFSF11O14788 317 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 HNRNPCL1O60812 293 aaKnown RBP16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 DNAJA2O60884 412 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 HNRNPCL4P0DMR1 293 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 IL11P20809 199 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 CCKARP32238 428 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 RYKP34925 604 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 UGT2B10P36537 528 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 NR1H2P55055 460 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ATP5J2P56134 94 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 SESN3P58005 492 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 TNK1Q13470 666 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 RPS26P11Q5JNZ5 115 aaPredicted RBP16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 MRPL2Q5T653 305 aaKnown RBP16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 DLEU7Q6UYE1 221 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 OR52P1PQ8NH57 321 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 OR2V1Q8NHB1 315 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ZNF563Q8TA94 476 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 FNDC9Q8TBE3 224 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 TMEM158Q8WZ71 300 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ST8SIA1Q92185 356 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 CNOT9Q92600 299 aaKnown RBP16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 MAL2Q969L2 176 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 STARD4Q96DR4 205 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ADGRG7Q96K78 797 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 KLHL15Q96M94 604 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 PRRG4Q9BZD6 226 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 CXorf56Q9H5V9 222 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 A4GALTQ9NPC4 353 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 EXOSC3Q9NQT5 275 aaKnown RBP16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 GMEB1Q9Y692 573 aa16.89■□□□□ 0.29
TRAPPC6A-201ENST00000006275 GJE1A6NN92 205 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 C5orf58C9J3I9 102 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ETV2O00321 342 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ADAMDEC1O15204 470 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 EFNA2O43921 213 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 CXCL13O43927 109 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 NTN1O95631 604 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 CRHP06850 196 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 POU2F1P14859 743 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 SLC6A8P48029 635 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 KCNJ5P48544 419 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 PLAURQ03405 335 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 KLF10Q13118 480 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 SELENBP1Q13228 472 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 NFYCQ13952 458 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 CTU2Q2VPK5 515 aaKnown RBP16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 LIN52Q52LA3 116 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 RUNDC3AQ59EK9 446 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 GCNT6Q5T4J0 391 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 HBMQ6B0K9 141 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 OR2A2Q6IF42 318 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 VWA1Q6PCB0 445 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ZNF474Q6S9Z5 364 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 RETREG3Q86VR2 466 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 VRK2Q86Y07 508 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 DPP10Q8N608 796 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ATP6V1C2Q8NEY4 427 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 C10orf82Q8WW14 230 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 SLC39A3Q9BRY0 314 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 OPN3Q9H1Y3 402 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 SAR1AQ9NR31 198 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ACER3Q9NUN7 267 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 DSPPQ9NZW4 1301 aa16.88■□□□□ 0.29
TRAPPC6A-201ENST00000006275 C16orf97H3BN30 126 aa16.87■□□□□ 0.29
TRAPPC6A-201ENST00000006275 SYNGR4O95473 234 aa16.87■□□□□ 0.29
TRAPPC6A-201ENST00000006275 ARAFP10398 606 aa16.87■□□□□ 0.29
TRAPPC6A-201ENST00000006275 PAX1P15863 534 aa16.87■□□□□ 0.29
TRAPPC6A-201ENST00000006275 GPX2P18283 190 aa16.87■□□□□ 0.29
TRAPPC6A-201ENST00000006275 LOXP28300 417 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC6A-201ENST00000006275 SHC1P29353 583 aa16.87■□□□□ 0.29
TRAPPC6A-201ENST00000006275 MERTKQ12866 999 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms