RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Polr2cP97760 275 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1283Q7TQY4 305 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Smarcd2Q99JR8 531 aaKnown RBP15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Supt7lQ9CZV5 412 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gdf2Q9WV56 428 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm8265K7N6Y8 158 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Chek1O35280 476 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ctu2Q3U308 514 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tle4Q62441 773 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tmem268Q8R239 342 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr472Q8VG43 310 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 FocadA2AKG8 1798 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Msto1Q2YDW2 556 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 AgmoQ8BS35 447 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Sbf2E9PXF8 1872 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 A430033K04RikE9Q8G5 680 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zfp275G3X904 499 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rhox5P52651 210 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Fut4Q11127 433 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1208Q8VG47 308 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dazap1Q9JII5 406 aaKnown RBP15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Pou2f2Q00196 463 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Nox3Q672J9 568 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1061Q7TR72 313 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Bmt2Q8BXK4 403 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dnajc22Q8CHS2 339 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Adarb1Q91ZS8 711 aaKnown RBP15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Prmt1Q9JIF0 371 aa15.66■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm21854A0A087WNM4 232 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn2r69G3XA45 850 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Etv1P41164 477 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Slc12a3P59158 1002 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Lsm5P62322 91 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Methig1Q76I26 264 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Chil6Q80W26 440 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 ManbaQ8K2I4 879 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Prelid1Q8R107 217 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr473Q8VG44 310 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Slc7a9Q9QXA6 487 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cdh20Q9Z0M3 801 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr74A2BHP6 318 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr417F8VQB1 309 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tbrg1Q3UB74 406 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zfp748Q7TPL6 888 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 PdhxQ8BKZ9 501 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Eif4e2Q8BMB3 245 aaKnown RBP15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tor2aQ8R1J9 321 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Raet1dQ9JI58 249 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 A0A1Y7VIT9 351 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cd80Q00609 306 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Fbxo34Q80XI1 695 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Znf385bQ8BXJ8 482 aaKnown RBP15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r212Q8R268 357 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Actr10Q9QZB7 417 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Btaf1E9QAE3 1848 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Sptbn2Q68FG2 2388 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Vmn1r94K7N6X3 305 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ptger1P35375 405 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Csf3rP40223 837 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Rps5P97461 204 aaKnown RBP15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dtx3lQ3UIR3 748 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Tas2r107Q7M725 308 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Klhdc8aQ91XA8 350 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ms4a10Q99N03 267 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zc3h8Q9JJ48 305 aaKnown RBP15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm5938A2AEN9 163 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Zfp616J3QN14 987 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 LumP51885 338 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Grxcr2Q3TYR5 254 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr381Q5SSP0 311 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Sorcs2Q9EPR5 1159 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 SrpxQ9R0M3 464 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cacna1aP97445 2368 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Gm4858A0A0A6YWS7 318 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 C7D3YXF5 845 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cxcl17Q5UW37 119 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr1128Q7TR47 311 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Bdh1Q80XN0 343 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Cdkl1Q8CEQ0 352 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 SharpinQ91WA6 380 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 MmabQ9D273 237 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 DhdhQ9DBB8 333 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Ccbe1Q3MI99 408 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Olfr732Q8VFT5 308 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Slc9a3r2Q9JHL1 337 aa15.65■□□□□ 0.1
Ccdc88a-201ENSMUST00000040182 Dpy19l1A6X919 746 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Znf683I7HJS4 458 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 JupQ02257 745 aaKnown RBP15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rasl2-9Q61820 216 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Il17aQ62386 158 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tbccd1Q640P7 552 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc25a32Q8BMG8 316 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 TardbpQ921F2 414 aaKnown RBP15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm13178B1AVU7 408 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm10375L7N286 184 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PigfO09101 219 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Il9rQ01114 468 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 AktipQ64362 292 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Kctd11Q8K485 232 aa15.64■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Hnf4gQ9WUU6 408 aa15.64■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 45.2 ms