RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Bmp1P98063 991 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 MakQ04859 622 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Q5SPV6 233 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 P4ha2Q60716 537 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Snap91Q61548 901 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Znf354aQ61751 572 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zswim9Q6DI92 447 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gpbp1l1Q6NZP2 473 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc6a5Q761V0 799 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Aldh3b1Q80VQ0 468 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 PeloQ80X73 385 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 C8bQ8BH35 589 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Oscp1Q8BHW2 379 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 MkxQ8BIA3 353 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Ces2eQ8BK48 559 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 DctdQ8K2D6 178 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc38a1Q8K2P7 485 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Plcz1Q8K4D7 647 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sec14l4Q8R0F9 403 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rfc3Q8R323 356 aaKnown RBP12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Or51e2Q8VBV9 320 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Pafah2Q8VDG7 390 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr1043Q8VFK4 314 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr853Q8VGG6 305 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dcbld1Q9D4J3 503 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 DynapQ9D7M5 161 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr705Q9EPF7 316 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 PpieQ9QZH3 301 aaKnown RBP12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cfap54Q8C6S9 3106 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Trpm6Q8CIR4 2028 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp811A0A0J9YU71 552 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gm45736A0A1B0GS18 427 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Glb1l3A2RSQ1 649 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp54E9PW05 585 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr1221L7MU53 311 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Lgals7O54974 136 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Yme1l1O88967 715 aaKnown RBP12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cd14P10810 366 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tead1P30051 426 aaKnown RBP12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr6P34986 316 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 KapP61110 121 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cmklr1P97468 371 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Serpine2Q07235 397 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rnf44Q3UHJ8 407 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Rnf223Q3UV31 285 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Adam12Q61824 903 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Lrrc75bQ7TPD7 306 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr857Q7TRF7 309 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 A730049H05RikQ8C940 139 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cdc73Q8JZM7 531 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Vmn1r74Q8R290 304 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Lingo1Q9D1T0 614 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 4930503E14RikQ9D583 177 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Sectm1bQ9JL59 212 aa12.49□□□□□ -0.41
Nup88-201ENSMUST00000035283 Snrnp200Q6P4T2 2136 aaKnown RBP12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Prss47A0A0N4SVQ0 395 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp937A2ANU7 503 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Olfr420E9Q4G0 321 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 1700080E11RikE9Q9G1 206 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 H2-M11F6U8V3 335 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gm8220F6YKI2 213 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 MfngO09008 321 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 PhyhO35386 338 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Adrb1P34971 466 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cdh4P39038 913 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 PitpnaP53810 271 aaKnown RBP12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 SgcgP82348 291 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 CbfbQ08024 187 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Hectd3Q3U487 861 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Lhfpl5Q4KL25 219 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 FcrlbQ5DRQ8 427 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dag1Q62165 893 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Kcmf1Q80UY2 381 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Znf689Q8BKK5 500 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Pi15Q8BS03 258 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 4921517D22RikQ8CET0 269 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Scamp1Q8K021 338 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Slc16a14Q8K1C7 512 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tsen15Q8R3W5 168 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Dusp15Q8R4V2 235 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tmem168Q91VX9 697 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Uxs1Q91XL3 420 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Mrgpra7Q91ZC5 305 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Pcyt2Q922E4 404 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 BollQ924M5 281 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 NaxdQ9CZ42 343 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Cmtm8Q9CZR4 173 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 FtmtQ9D5H4 237 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Pmepa1Q9D7R2 260 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Col4a6B1AVK5 1691 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Tet2Q4JK59 1912 aaKnown RBP12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Stpg3A2RSX4 306 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp989H3BLB0 661 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Zfp870J3QMA4 560 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Gm8906L7N2A2 181 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 P01629 112 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 TfptQ3U1J1 259 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 Eid2Q6X7S9 236 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 IfnkQ7TSL0 199 aa12.48□□□□□ -0.41
Nup88-201ENSMUST00000035283 AasdhQ80WC9 1100 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms