RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Hcfc1r1Q9CYQ5 120 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Amd2D3Z6H8 334 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Slc38a6G3UVW3 457 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm21797J3QNW5 180 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Snrpd1P62315 119 aaKnown RBP15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Bmp1P98063 991 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Arntl2Q2VPD4 579 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Spire1Q52KF3 598 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Dhrs9Q58NB6 319 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Tp53i13Q5F267 385 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr146Q60884 306 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr1031Q7TR87 336 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr205Q7TS37 305 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Arl15Q8BGR6 204 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Comtd1Q8BIG7 262 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Adamts4Q8BNJ2 833 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ankmy1Q8C0W1 906 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Tada1Q99LM9 335 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Rpl17Q9CPR4 184 aaKnown RBP15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Capns2Q9D7J7 247 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Sult1c2Q9D939 296 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 RhouQ9EQT3 261 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hapln1Q9QUP5 356 aaKnown RBP15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Eci2Q9WUR2 391 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Kif26bQ7TNC6 2112 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm595A2AF73 655 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cd63P41731 238 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Akr1c18Q8K023 323 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Slc16a14Q8K1C7 512 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 ApehQ8R146 732 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zmynd11Q8R5C8 602 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Camk1gQ91VB2 477 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Atg13Q91YI1 516 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Rpn2Q9DBG6 631 aaKnown RBP15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Oaz3Q9R109 243 aa15.67■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm21854A0A087WNM4 232 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Igkv17-121A0A0G2JFA8 117 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm7792A0A0J9YU01 481 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2abC0HKE1 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2acC0HKE2 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2adC0HKE3 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2aeC0HKE4 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2agC0HKE5 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2aiC0HKE6 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2anC0HKE7 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2aoC0HKE8 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2apC0HKE9 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm3183D3YUJ6 481 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm17728E9Q5K2 132 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Vmn1r55E9Q8I6 310 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm3139J3QK78 481 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm3106J3QPH3 481 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mmp2P33434 662 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Map2k4P47809 397 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 AhrrQ3U1U7 701 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Adam30Q811Q3 732 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist3h2aQ8BFU2 130 aaKnown RBP15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Rad51ap1Q8C551 337 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Fam25cQ8CF02 89 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2afQ8CGP5 130 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist1h2ahQ8CGP6 128 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mrps23Q8VE22 177 aaKnown RBP15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Duoxa1Q8VE49 341 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Clp1Q99LI9 425 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Spg21Q9CQC8 308 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Izumo1rQ9EQF4 244 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Calm4Q9JM83 148 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm11168J3QN50 228 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ppp2cbP62715 309 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Ppp2caP63330 309 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr332Q5NC45 344 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Taar7eQ5QD09 358 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 BocQ6AZB0 1110 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Nupl2Q8CIC2 420 aaKnown RBP15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gatad2bQ8VHR5 594 aaKnown RBP15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Dph7Q9CYU6 477 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Glipr1l1Q9DAG6 236 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hspb3Q9QZ57 154 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Olfr1193A2AV13 318 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Gm20518E9Q548 580 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Stxbp1O08599 594 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Klrb1aP27811 227 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 TpoP35419 914 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Mapk14P47811 360 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Zc3hav1Q3UPF5 946 aaKnown RBP15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Galnt12Q8BGT9 576 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Vmn1r87Q8R255 295 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Aqp3Q8R2N1 292 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cavin3Q91VJ2 260 aa15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 PpieQ9QZH3 301 aaKnown RBP15.66■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Auts2A0A087WPF7 1261 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Cfap77A0A087WRI3 283 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Spin2-ps6A0A140T8V2 174 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Esp34G3UXG0 151 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Kpna3O35344 521 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 St8sia2O35696 375 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 NfyaP23708 346 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Tbxa2rP30987 341 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Foxr1Q3UTB7 268 aa15.65■□□□□ 0.1
Ctcf-201ENSMUST00000005841 Hist2h2aa1Q6GSS7 130 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 27.7 ms