RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 GXYLT2A0PJZ3 443 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 IDSB3KWA1 339 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 RCBTB2O95199 551 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 CSTAP01040 98 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 SMIM18P0DKX4 95 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 SPTBP11277 2137 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF28P17035 718 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 PTGER1P34995 402 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 ALDH3B2P48448 385 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 CCL11P51671 97 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 EBPQ15125 230 aaKnown RBP15.75■□□□□ 0.11
PHGDH-234ENST00000642041 OR1Q1Q15612 314 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 ZBED5Q49AG3 693 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 KLHL26Q53HC5 615 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 CCNJQ5T5M9 372 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 SLX4IPQ5VYV7 408 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 SLC6A19Q695T7 634 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 MRPL14Q6P1L8 145 aaKnown RBP15.75■□□□□ 0.11
PHGDH-234ENST00000642041 KLHL17Q6TDP4 642 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 COX15Q7KZN9 410 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 GPR141Q7Z602 305 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 GALNT6Q8NCL4 622 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 TEX47Q8TBZ9 253 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 SNRNP40Q96DI7 357 aaKnown RBP15.75■□□□□ 0.11
PHGDH-234ENST00000642041 LURAP1Q96LR2 239 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 NODALQ96S42 347 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 BARD1Q99728 777 aaKnown RBP15.75■□□□□ 0.11
PHGDH-234ENST00000642041 NIPSNAP1Q9BPW8 284 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 RACGAP1Q9H0H5 632 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 DUSP21Q9H596 190 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 SLC25A19Q9HC21 320 aa15.75■□□□□ 0.11
PHGDH-234ENST00000642041 CNOT2Q9NZN8 540 aaKnown RBP15.75■□□□□ 0.11
PHGDH-234ENST00000642041 ANKHD1Q8IWZ3 2542 aaKnown RBP15.74■□□□□ 0.11
PHGDH-234ENST00000642041 PKDREJQ9NTG1 2253 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 A0A087WUU8 490 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 EFCAB10A6NFE3 127 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 OR6C70A6NIJ9 312 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 H3BN98 237 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 SLC1A7O00341 560 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 MITFO75030 526 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-234ENST00000642041 ICAM2P13598 275 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 ATP6V1B1P15313 513 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 GSSP48637 474 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF136P52737 540 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 DNASE1L3Q13609 305 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 EXT1Q16394 746 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 PDZK1Q5T2W1 519 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 TMPRSS11FQ6ZWK6 438 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 GDF7Q7Z4P5 450 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 CPEB2Q7Z5Q1 589 aaKnown RBP15.74■□□□□ 0.11
PHGDH-234ENST00000642041 ANKRD37Q7Z713 158 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 RBM45Q8IUH3 476 aaKnown RBP15.74■□□□□ 0.11
PHGDH-234ENST00000642041 LACC1Q8IV20 430 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 OR9Q2Q8NGE9 314 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 ZNF420Q8TAQ5 688 aaPredicted RBP15.74■□□□□ 0.11
PHGDH-234ENST00000642041 FAM81AQ8TBF8 368 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 GTPBP3Q969Y2 492 aaKnown RBP15.74■□□□□ 0.11
PHGDH-234ENST00000642041 TMCO6Q96DC7 493 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 BCL7BQ9BQE9 202 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 LAT2Q9GZY6 243 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 QRSL1Q9H0R6 528 aaKnown RBP15.74■□□□□ 0.11
PHGDH-234ENST00000642041 MAN2C1Q9NTJ4 1040 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 ASF1BQ9NVP2 202 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 RHCGQ9UBD6 479 aa15.74■□□□□ 0.11
PHGDH-234ENST00000642041 SCN2AQ99250 2005 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 LOC102723996A0A087X1L8 192 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 CPSF4LA6NMK7 179 aaKnown RBP15.73■□□□□ 0.11
PHGDH-234ENST00000642041 GTPBP1O00178 669 aaKnown RBP15.73■□□□□ 0.11
PHGDH-234ENST00000642041 NOL3O60936 208 aaKnown RBP15.73■□□□□ 0.11
PHGDH-234ENST00000642041 ZFAND5O76080 213 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 CLIC3O95833 236 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 CLPSP04118 112 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 RAB40ALP0C0E4 278 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 UBL4AP11441 157 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 BMP7P18075 431 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 CHMP24386 653 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 ITGA3P26006 1051 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 GIPRP48546 466 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 MAP2K6P52564 334 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 CTBP2P56545 445 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 PRKCDQ05655 676 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 CHAF1BQ13112 559 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 OCLNQ16625 522 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 MEP1AQ16819 746 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 SLC27A4Q6P1M0 643 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 C5orf46Q6UWT4 87 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 NPSR1Q6W5P4 371 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 PTCHD4Q6ZW05 846 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 PRSS48Q7RTY5 328 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 WDR53Q7Z5U6 358 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-234ENST00000642041 ZER1Q7Z7L7 766 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 RBMXL3Q8N7X1 1067 aaKnown RBP15.73■□□□□ 0.11
PHGDH-234ENST00000642041 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.73■□□□□ 0.11
PHGDH-234ENST00000642041 TMEM239Q8WW34 195 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 CRB3Q9BUF7 120 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 POLDIP3Q9BY77 421 aaKnown RBP15.73■□□□□ 0.11
PHGDH-234ENST00000642041 WWTR1Q9GZV5 400 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 SDHAF3Q9NRP4 125 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 IL20Q9NYY1 176 aa15.73■□□□□ 0.11
PHGDH-234ENST00000642041 RPL36Q9Y3U8 105 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms