RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	ADAM11	O75078	769 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	HNRNPCL4	P0DMR1	293 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	BMP2	P12643	396 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	POU2F1	P14859	743 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	IDH2	P48735	452 aa	Known RBP	13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	RAC3	P60763	192 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	FAM27E3	Q08E93	113 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	RNPS1	Q15287	305 aa	Known RBP	13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	LIN52	Q52LA3	116 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	PAGE3	Q5JUK9	113 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	FCRLA	Q7L513	359 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	GRINA	Q7Z429	371 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	CDH24	Q86UP0	819 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	MSRB3	Q8IXL7	192 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF610	Q8N9Z0	462 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	OR52P1P	Q8NH57	321 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	RNF128	Q8TEB7	428 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	OR5B2	Q96R09	309 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	GPATCH1	Q9BRR8	931 aa	Known RBP	13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	CCDC106	Q9BWC9	280 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	A4GALT	Q9NPC4	353 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	CTPS2	Q9NRF8	586 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	PLSCR4	Q9NRQ2	329 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	RASSF1	Q9NS23	344 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLC25A37	Q9NYZ2	338 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	CHRNA9	Q9UGM1	479 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	NDRG3	Q9UGV2	375 aa		13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	SPIN1	Q9Y657	262 aa	Predicted RBP	13.43	□□□□□ -0.26
PHGDH-231	ENST00000641939	PRR14L	Q5THK1	2151 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	CFAP73	A6NFT4	308 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	FAAH	O00519	579 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	AP3D1	O14617	1153 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	NUDT7	P0C024	238 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	PPIB	P23284	216 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	AGTR1	P30556	359 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	HTR3A	P46098	478 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	KCNJ5	P48544	419 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	LARS2	Q15031	903 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZSWIM7	Q19AV6	140 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	HSP90B2P	Q58FF3	399 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	SYT14P1	Q58G82	188 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	PRAMEF8	Q5VWM4	474 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	PRAMEF7	Q5VXH5	474 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	VRK2	Q86Y07	508 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF440	Q8IYI8	595 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLC43A2	Q8N370	569 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	ABHD3	Q8WU67	409 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	MAL2	Q969L2	176 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	POLDIP3	Q9BY77	421 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF385D	Q9H6B1	395 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	CACYBP	Q9HB71	228 aa	Known RBP	13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	GP6	Q9HCN6	339 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	BCL2L10	Q9HD36	194 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	VAPA	Q9P0L0	249 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF443	Q9Y2A4	671 aa	Predicted RBP	13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	GMEB1	Q9Y692	573 aa		13.42	□□□□□ -0.26
PHGDH-231	ENST00000641939	TRBV5-3	A0A0A0MS03	114 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	IGHV3-15	A0A0B4J1V0	119 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	CDHR4	A6H8M9	788 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	PRKD3	O94806	890 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	GOSR1	O95249	250 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	THBS1	P07996	1170 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	TFPI	P10646	304 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	UQCRB	P14927	111 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	CD1E	P15812	388 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	ENPP1	P22413	925 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	FKBP2	P26885	142 aa	Known RBP	13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	UGT2B10	P36537	528 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	EPS8	Q12929	822 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	TMEM201	Q5SNT2	666 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	RNF220	Q5VTB9	566 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	METTL21C	Q5VZV1	264 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF836	Q6ZNA1	936 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	TMPPE	Q6ZT21	453 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	STK32C	Q86UX6	486 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	ADGRG3	Q86Y34	549 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	RLIM	Q9NVW2	624 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	KLHL13	Q9P2N7	655 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	LEF1	Q9UJU2	399 aa	Predicted RBP	13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	ZNF232	Q9UNY5	417 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	CORO2B	Q9UQ03	480 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	IFT52	Q9Y366	437 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	TESMIN	Q9Y4I5	508 aa		13.41	□□□□□ -0.26
PHGDH-231	ENST00000641939	ROS1	P08922	2347 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	EVPLL	A8MZ36	301 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	C5orf58	C9J3I9	102 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	C16orf97	H3BN30	126 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	SULT2B1	O00204	365 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	GKN3P	P0CG01	181 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	TROVE2	P10155	538 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	SLC1A3	P43003	542 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	CLK1	P49759	484 aa	Known RBP	13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	DIO1	P49895	249 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	POLR2H	P52434	150 aa	Known RBP	13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	CSNK2A1	P68400	391 aa	Predicted RBP	13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	EXOC3L2	Q2M3D2	409 aa		13.4	□□□□□ -0.26
PHGDH-231	ENST00000641939	GCNT6	Q5T4J0	391 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms