RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZNF550Q7Z398 422 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 TSEN54Q7Z6J9 526 aaKnown RBP8.53□□□□□ -1.04
PHGDH-228ENST00000641847 BIVMQ86UB2 503 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 CYP4Z1Q86W10 505 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 TOR1AIP2Q8NFQ8 470 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 SPATA3Q8NHX4 192 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 B4GALNT2Q8NHY0 566 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 NINJ1Q92982 152 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 SLC35B4Q969S0 331 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 ARSGQ96EG1 525 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF300Q96RE9 604 aaPredicted RBP8.53□□□□□ -1.04
PHGDH-228ENST00000641847 TAAR6Q96RI8 345 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 ZNF559Q9BR84 538 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 ANGPTL4Q9BY76 406 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 HES7Q9BYE0 225 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 LAT2Q9GZY6 243 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 PROK2Q9HC23 129 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 IL1RAPQ9NPH3 570 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 SDHAF3Q9NRP4 125 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 NDUFAF4Q9P032 175 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 ENPP4Q9Y6X5 453 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 COL6A5A8TX70 2615 aa8.53□□□□□ -1.04
PHGDH-228ENST00000641847 FLNAP21333 2647 aaKnown RBP8.53□□□□□ -1.04
PHGDH-228ENST00000641847 IGLV3-32A0A0A0MS00 114 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PINLYPA6NC86 204 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ANKRD33BA6NCL7 494 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 CPSF4LA6NMK7 179 aaKnown RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 B4DXG7 233 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 J3KTA2 159 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 GNB5O14775 395 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 NME2P1O60361 137 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 FMO6PO60774 539 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ADAM11O75078 769 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 DIRAS1O95057 198 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 SNX4O95219 450 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 BAG2O95816 211 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 UQCRBP14927 111 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 CD46P15529 392 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ITGA2P17301 1181 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 NME2P22392 152 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 RYKP34925 604 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 YAP1P46937 504 aaKnown RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 SLC6A8P48029 635 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF136P52737 540 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 IST1P53990 364 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 SUMO3P55854 103 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 TAS2R41P59536 307 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 GPR85P60893 370 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 SPIBQ01892 262 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 CBFBQ13951 182 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 C3AR1Q16581 482 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 IQCCQ4KMZ1 466 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 KRTCAP3Q53RY4 240 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF766Q5HY98 468 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 OR5M10Q6IEU7 315 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PIWIL3Q7Z3Z3 882 aaKnown RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PACS2Q86VP3 889 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PLCZ1Q86YW0 608 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 FADS6Q8N9I5 356 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 OR2M3Q8NG83 312 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 OR4K17Q8NGC6 315 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 OR5W2Q8NH69 310 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 DUSP19Q8WTR2 217 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PHF10Q8WUB8 498 aaKnown RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 HAS2Q92819 552 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 NTNG2Q96CW9 530 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 SCMH1Q96GD3 660 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 TMEM41AQ96HV5 264 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF597Q96LX8 424 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PRRC1Q96M27 445 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 JSRP1Q96MG2 331 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ZNF347Q96SE7 839 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 MCHR1Q99705 422 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PIP5K1AQ99755 562 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 KLHDC3Q9BQ90 382 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 PRR14Q9BWN1 585 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 CXXC4Q9H2H0 198 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 GSX1Q9H4S2 264 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 HHATLQ9HCP6 504 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 KLHL1Q9NR64 748 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 CTPS2Q9NRF8 586 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 TINAGQ9UJW2 476 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 ICAM5Q9UMF0 924 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 MEMO1Q9Y316 297 aa8.52□□□□□ -1.05
PHGDH-228ENST00000641847 FAM32AQ9Y421 112 aaKnown RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 NSD1Q96L73 2696 aaPredicted RBP8.52□□□□□ -1.05
PHGDH-228ENST00000641847 CSPG4Q6UVK1 2322 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 LRRC3CA6NJW4 275 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 FAM47E-STBD1D6RA91 191 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 MGRN1O60291 552 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 CDC40O60508 579 aaKnown RBP eCLIP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TPST2O60704 377 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 TRIM3O75382 744 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 DEAF1O75398 565 aaPredicted RBP8.51□□□□□ -1.05
PHGDH-228ENST00000641847 OR5F1O95221 314 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 ATP6V1G2O95670 118 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 NUDT14O95848 222 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 CST1P01037 141 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 SP1P08047 785 aa8.51□□□□□ -1.05
PHGDH-228ENST00000641847 ANPEPP15144 967 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms