RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 INPP5JQ15735 1006 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-218ENST00000641491 PLPPR5Q32ZL2 321 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 PLEKHN1Q494U1 663 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-218ENST00000641491 COLEC12Q5KU26 742 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 PPP4R4Q6NUP7 873 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 C5orf46Q6UWT4 87 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 ARSKQ6UWY0 536 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 ZNF730Q6ZMV8 503 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 RBM45Q8IUH3 476 aaKnown RBP11.76□□□□□ -0.53
PHGDH-218ENST00000641491 OFCC1Q8IZS5 231 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 MEIOBQ8N635 442 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 FAM86B1Q8N7N1 296 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 LSMEM1Q8N8F7 131 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
PHGDH-218ENST00000641491 ATP6V1C2Q8NEY4 427 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 MPP4Q96JB8 637 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 TAPBPLQ9BX59 468 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 RTN4RQ9BZR6 473 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 AMBRA1Q9C0C7 1298 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 KLHL4Q9C0H6 718 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 DEFB127Q9H1M4 99 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 C12orf10Q9HB07 376 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 NPIPA1Q9UND3 350 aa11.76□□□□□ -0.53
PHGDH-218ENST00000641491 RRP15Q9Y3B9 282 aaKnown RBP11.76□□□□□ -0.53
PHGDH-218ENST00000641491 SAMHD1Q9Y3Z3 626 aaKnown RBP11.76□□□□□ -0.53
PHGDH-218ENST00000641491 PTPN13Q12923 2485 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 TMED7-TICAM2A0A0A6YYA0 188 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 PINLYPA6NC86 204 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 H0Y3Z8 333 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 K7EM74 188 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 OIP5O43482 229 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 HCN1O60741 890 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 TIPRLO75663 272 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 HPNP05981 417 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 PRG2P13727 222 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 PRKCAP17252 672 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 NUP107P57740 925 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 RPS3AP61247 264 aaKnown RBP11.75□□□□□ -0.53
PHGDH-218ENST00000641491 VLDLRP98155 873 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 SRSF1Q07955 248 aaKnown RBP eCLIP11.75□□□□□ -0.532e-10■■■□□ 18.2
PHGDH-218ENST00000641491 FOXO1Q12778 655 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 NFATC3Q12968 1075 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 PIN1Q13526 163 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-218ENST00000641491 SF3B4Q15427 424 aaKnown RBP eCLIP11.75□□□□□ -0.533e-16■■■■■ 41.5
PHGDH-218ENST00000641491 HYAL4Q2M3T9 481 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 WIPI1Q5MNZ9 446 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-218ENST00000641491 DCST1Q5T197 706 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 OR2T5Q6IEZ7 315 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 LACC1Q8IV20 430 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 GHDCQ8N2G8 530 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 GTPBP8Q8N3Z3 284 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-218ENST00000641491 LINC00471Q8N535 108 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 OR2T29Q8NH02 315 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 OR52J3Q8NH60 311 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 ZHX1-C8orf76Q96EF9 292 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 HS6ST2Q96MM7 605 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 OR2B2Q9GZK3 357 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 ANKRD19PQ9H560 264 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 ZNF556Q9HAH1 456 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 PROK2Q9HC23 129 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 S100A14Q9HCY8 104 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 TIGARQ9NQ88 270 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 ARMC1Q9NVT9 282 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 NDUFAF4Q9P032 175 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 RHCGQ9UBD6 479 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 DNAJB9Q9UBS3 223 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 CHRNA9Q9UGM1 479 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 RIMS3Q9UJD0 308 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 TMED7Q9Y3B3 224 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 MRPS18CQ9Y3D5 142 aaKnown RBP11.75□□□□□ -0.53
PHGDH-218ENST00000641491 ATMQ13315 3056 aa11.75□□□□□ -0.53
PHGDH-218ENST00000641491 A0A0B4J2E0 115 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 A0A1B0GX12 115 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 C17orf51A8MQB3 221 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 CLOCKO15516 846 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 SUSD5O60279 629 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 BCAS1O75363 584 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 GLSO94925 669 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 DIRAS1O95057 198 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 AHSA1O95433 338 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 PEPDP12955 493 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 RBM34P42696 430 aaKnown RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 ACAA2P42765 397 aaKnown RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 ZNF136P52737 540 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 CASP6P55212 293 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 ELF3P78545 371 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 NPTX1Q15818 432 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 KRTCAP3Q53RY4 240 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 ARHGAP11AQ6P4F7 1023 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 PIWIL3Q7Z3Z3 882 aaKnown RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 GDF7Q7Z4P5 450 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 CISD2Q8N5K1 135 aaKnown RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 EXD3Q8N9H8 876 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 PIGXQ8TBF5 258 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 ABTB1Q969K4 478 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 C3orf49Q96BT1 292 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 SARAFQ96BY9 339 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 TSPAN10Q9H1Z9 355 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-218ENST00000641491 VCXQ9H320 206 aa11.74□□□□□ -0.53
PHGDH-218ENST00000641491 ACKR4Q9NPB9 350 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms