RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 FRRS1Q6ZNA5 592 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 EIF3MQ7L2H7 374 aaKnown RBP12.96□□□□□ -0.33
SRRT-219ENST00000641476 KIRREL3Q8IZU9 778 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 ZNF619Q8N2I2 560 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 RAB3IL1Q8TBN0 382 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 TMEM171Q8WVE6 324 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 RAB8BQ92930 207 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 KISS1RQ969F8 398 aaPredicted RBP12.96□□□□□ -0.33
SRRT-219ENST00000641476 OR5B2Q96R09 309 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 POTEKPQ9BYX7 375 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 PCDHGB4Q9UN71 923 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.96□□□□□ -0.33
SRRT-219ENST00000641476 WDR45Q9Y484 360 aa12.96□□□□□ -0.33
SRRT-219ENST00000641476 PRSS51A0A1B0GVH4 220 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 RNF223E7ERA6 249 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 CYTIPO60759 359 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 CPSF4O95639 269 aaKnown RBP12.95□□□□□ -0.34
SRRT-219ENST00000641476 AGR2O95994 175 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 F12P00748 615 aaPredicted RBP12.95□□□□□ -0.34
SRRT-219ENST00000641476 TP53P04637 393 aaPredicted RBP12.95□□□□□ -0.34
SRRT-219ENST00000641476 FESP07332 822 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 YES1P07947 543 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 LBPP18428 481 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 PGCP20142 388 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 UQCRC2P22695 453 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 PGM1P36871 562 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 CLNS1AP54105 237 aaKnown RBP12.95□□□□□ -0.34
SRRT-219ENST00000641476 ATP5J2P56134 94 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 MAGOHP61326 146 aaKnown RBP12.95□□□□□ -0.34
SRRT-219ENST00000641476 PLAURQ03405 335 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 MERTKQ12866 999 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 MPP2Q14168 576 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 TAB1Q15750 504 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 FAM174BQ3ZCQ3 159 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 SYT14P1Q58G82 188 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 ANXA8L1Q5VT79 327 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 ABLIM2Q6H8Q1 611 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 SEZ6L2Q6UXD5 910 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 LRRC34Q8IZ02 419 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 ZNF611Q8N823 705 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 SLC25A43Q8WUT9 341 aaPredicted RBP12.95□□□□□ -0.34
SRRT-219ENST00000641476 OIT3Q8WWZ8 545 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 TMEM234Q8WY98 164 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 AKAP1Q92667 903 aaKnown RBP eCLIP12.95□□□□□ -0.34
SRRT-219ENST00000641476 ROPN1LQ96C74 230 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 NEURL3Q96EH8 262 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 ZNF300Q96RE9 604 aaPredicted RBP12.95□□□□□ -0.34
SRRT-219ENST00000641476 SLC35A5Q9BS91 424 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 HDHD5Q9BXW7 423 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 CXorf56Q9H5V9 222 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 MEAF6Q9HAF1 191 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 POLE3Q9NRF9 147 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 ACER3Q9NUN7 267 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 SLC35A3Q9Y2D2 325 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 RNF115Q9Y4L5 304 aa12.95□□□□□ -0.34
SRRT-219ENST00000641476 USF3Q68DE3 2245 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 ZNF814B7Z6K7 855 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 PHF1O43189 567 aaPredicted RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 ADAP00813 363 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 GUSBP08236 651 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 ALDOCP09972 364 aaKnown RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 PAX1P15863 534 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 EDNRAP25101 427 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 CHI3L1P36222 383 aaPredicted RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 OR3A2P47893 321 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 DIO1P49895 249 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 HPCAP84074 193 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 RASGEF1BQ0VAM2 473 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 BST1Q10588 318 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 STX3Q13277 289 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 CAPRIN1Q14444 709 aaKnown RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 P2RY6Q15077 328 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 OGFOD2Q6N063 350 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 Q6ZT83 130 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 HMGN2P46Q86SG4 172 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 ATG4DQ86TL0 474 aaPredicted RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 VPS37AQ8NEZ2 397 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 XAGE5Q8WWM1 108 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 ATP6V1G3Q96LB4 118 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 CCDC115Q96NT0 180 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 ZNF701Q9NV72 531 aaPredicted RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 PNPOQ9NVS9 261 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 MARCOQ9UEW3 520 aaPredicted RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 PRSS50Q9UI38 385 aa12.94□□□□□ -0.34
SRRT-219ENST00000641476 CHD3Q12873 2000 aaKnown RBP12.94□□□□□ -0.34
SRRT-219ENST00000641476 PRAMEF27A3QJZ7 478 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 C9JVG2 144 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 HAX1O00165 279 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 SDHDO14521 159 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 CLOCKO15516 846 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 TMCC2O75069 709 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 LYZL6O75951 148 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 C1QCP02747 245 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 COX5AP20674 150 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 S100A3P33764 101 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 NME5P56597 212 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 CSNK2A1P68400 391 aaPredicted RBP12.93□□□□□ -0.34
SRRT-219ENST00000641476 ITGADQ13349 1161 aa12.93□□□□□ -0.34
SRRT-219ENST00000641476 VEZF1Q14119 521 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms