RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ATXN8OSP0DMR3 200 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 GALP22466 123 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 GALNSP34059 522 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 EIF2B2P49770 351 aaKnown RBP15.69■□□□□ 0.1
PHGDH-211ENST00000641213 XKRXQ6PP77 449 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 SLC43A2Q8N370 569 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 ZBTB8BQ8NAP8 495 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-211ENST00000641213 ZSCAN1Q8NBB4 408 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 CHRNA10Q9GZZ6 450 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 ADGRL4Q9HBW9 690 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 TIGARQ9NQ88 270 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 INPP5EQ9NRR6 644 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 POLHQ9Y253 713 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 MAU2Q9Y6X3 613 aa15.69■□□□□ 0.1
PHGDH-211ENST00000641213 COL5A1P20908 1838 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-211ENST00000641213 C2orf92A0A1B0GVN3 265 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 FABP12A6NFH5 140 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 TTC36A6NLP5 189 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 MRPL3P09001 348 aaKnown RBP15.68■□□□□ 0.1
PHGDH-211ENST00000641213 SBK2P0C263 348 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 IL7P13232 177 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 RPL6Q02878 288 aaKnown RBP15.68■□□□□ 0.1
PHGDH-211ENST00000641213 SERTAD2Q14140 314 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 KCNAB1Q14722 419 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 CARTPTQ16568 116 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.68■□□□□ 0.1
PHGDH-211ENST00000641213 C14orf28Q4W4Y0 310 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 ARHGAP11AQ6P4F7 1023 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 SPATC1Q76KD6 591 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 TXNDC15Q96J42 360 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 RAB33BQ9H082 229 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 UCKL1Q9NWZ5 548 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 EPHA6Q9UF33 1036 aa15.68■□□□□ 0.1
PHGDH-211ENST00000641213 C17orf105B2RV13 164 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 GTPBP1O00178 669 aaKnown RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 DVL2O14641 736 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 PRKNO60260 465 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 NCR1O76036 304 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 GYPBP06028 91 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 GPR143P51810 404 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 NXPH1P58417 271 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 HNRNPKP61978 463 aaKnown RBP eCLIP15.67■□□□□ 0.13e-7■□□□□ 8.5
PHGDH-211ENST00000641213 CBX3Q13185 183 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 GRM7Q14831 915 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 CELF2-AS1Q8N7Q2 184 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 OR5M3Q8NGP4 307 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 ZDHHC12Q96GR4 267 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 ERMAPQ96PL5 475 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 LMF1Q96S06 567 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 ATF6BQ99941 703 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 PELOQ9BRX2 385 aaKnown RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 FOXQ1Q9C009 403 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 PCED1AQ9H1Q7 454 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 MKKSQ9NPJ1 570 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 LANCL2Q9NS86 450 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 HAO2Q9NYQ3 351 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 PRODH2Q9UF12 536 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 CHRNA9Q9UGM1 479 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 SERTAD3Q9UJW9 196 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 ICAM5Q9UMF0 924 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 A0A087WUJ7 227 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 RHPN2P1A8MT19 583 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 RGS9O75916 674 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 IFNGP01579 166 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 KLHL26Q53HC5 615 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 NRARPQ7Z6K4 114 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 LRRC17Q8N6Y2 441 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 OR5W2Q8NH69 310 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 PTPMT1Q8WUK0 201 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 EFHD2Q96C19 240 aaPredicted RBP15.67■□□□□ 0.1
PHGDH-211ENST00000641213 SGTBQ96EQ0 304 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 TRIM36Q9NQ86 728 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 COMMD3Q9UBI1 195 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 PCDHGB2Q9Y5G2 931 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 UNC13CQ8NB66 2214 aa15.67■□□□□ 0.1
PHGDH-211ENST00000641213 A0A1W2PQ09 198 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 POLR1CO15160 346 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-211ENST00000641213 NDUFB2O95178 105 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 MT-ND5P03915 603 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 PPP3R1P63098 170 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 ZNF85Q03923 595 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 SELENBP1Q13228 472 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 BIKQ13323 160 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 CCDC85BQ15834 202 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-211ENST00000641213 ZNF321PQ8N8H1 164 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 IL17RDQ8NFM7 739 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 NLGN4YQ8NFZ3 816 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-211ENST00000641213 OR7G1Q8NGA0 311 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 OR52E2Q8NGJ4 325 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 C1orf216Q8TAB5 229 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 SLC2A12Q8TD20 617 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 SMAP2Q8WU79 429 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-211ENST00000641213 SMPDL3BQ92485 455 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 SENP5Q96HI0 755 aaPredicted RBP15.66■□□□□ 0.1
PHGDH-211ENST00000641213 HSPA12BQ96MM6 686 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 CUTCQ9NTM9 273 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 RNF215Q9Y6U7 377 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 USP34Q70CQ2 3546 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 SEC16AO15027 2179 aa15.66■□□□□ 0.1
PHGDH-211ENST00000641213 MCIDASD6RGH6 385 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms