RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 MPPED1O15442 326 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 FAM189A1O60320 539 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 STK17BO94768 372 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 IGHA1P01876 353 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF23P17027 643 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 CDH5P33151 784 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-220ENST00000639841 TUBA1BP68363 451 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 IRX1P78414 480 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-220ENST00000639841 SGSM1Q2NKQ1 1148 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 SCYL2Q6P3W7 929 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 CCNI2Q6ZMN8 369 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-220ENST00000639841 TUBA1AQ71U36 451 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 TMEM150AQ86TG1 271 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 LRRC34Q8IZ02 419 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 CLEC4FQ8N1N0 589 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 CPSF7Q8N684 471 aaKnown RBP6.54□□□□□ -1.36
NECAP1-220ENST00000639841 OR1L6Q8NGR2 347 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 TSSK3Q96PN8 268 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 SLC38A2Q96QD8 506 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 COPS8Q99627 209 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 CMKLR1Q99788 373 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 POTEKPQ9BYX7 375 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 DCLK3Q9C098 648 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 SDCBP2Q9H190 292 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 KLHL31Q9H511 634 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 CLK4Q9HAZ1 481 aaKnown RBP6.54□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF701Q9NV72 531 aaPredicted RBP6.54□□□□□ -1.36
NECAP1-220ENST00000639841 PCMTD2Q9NV79 361 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 C2orf42Q9NWW7 574 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 PHF11Q9UIL8 331 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 SIX4Q9UIU6 781 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 SCML1Q9UN30 329 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 MYO15AQ9UKN7 3530 aa6.54□□□□□ -1.36
NECAP1-220ENST00000639841 PKD1L2Q7Z442 2459 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 SMCO3A2RU48 225 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 SERINC4A6NH21 518 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF99A8MXY4 864 aaPredicted RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 MLNRO43193 412 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 SULT1B1O43704 296 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 HYAL3O43820 417 aaPredicted RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 BRI3O95415 125 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 KLF8O95600 359 aaPredicted RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 GSTT2P0CG29 244 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 GSTT2BP0CG30 244 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 OPRD1P41143 372 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 HTR5AP47898 357 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 IST1P53990 364 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 CDH12P55289 794 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 HERVK_113P63132 956 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 BASP1P80723 227 aaKnown RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 KDSRQ06136 332 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 GPR50Q13585 617 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 CRMP1Q14194 572 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 TRIP6Q15654 476 aaKnown RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 TIGD2Q4W5G0 525 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 FAM71F2Q6NXP2 309 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 DOK6Q6PKX4 331 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 CYP4Z1Q86W10 505 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 KLHDC1Q8N7A1 406 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 LRTM2Q8N967 370 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 GATSQ8NAP1 163 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 NOA1Q8NC60 698 aaKnown RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 OR7G2Q8NG99 324 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 OR9G4Q8NGQ1 327 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 OR1F12Q8NHA8 337 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 CCDC107Q8WV48 283 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 NUDCD2Q8WVJ2 157 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 IRGQQ8WZA9 623 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 XPO6Q96QU8 1125 aaKnown RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 MAP3K3Q99759 626 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 DPH7Q9BTV6 452 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ERVK-6Q9BXR3 956 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 TM6SF2Q9BZW4 377 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 NDEL1Q9GZM8 345 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ELOVL4Q9GZR5 314 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 C1orf123Q9NWV4 160 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ADA2Q9NZK5 511 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 CCL26Q9Y258 94 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 PCDH15Q96QU1 1955 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF732B4DXR9 585 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 TMEM178BH3BS89 294 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 K7EQS6 105 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ZIC3O60481 467 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ATP5HO75947 161 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 TNNI1P19237 187 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 EWSR1Q01844 656 aaKnown RBP eCLIP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 PLOD1Q02809 727 aaPredicted RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 C1orf61Q13536 156 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 FASTKD3Q14CZ7 662 aaKnown RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 C18orf21Q32NC0 220 aaPredicted RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 FAM69BQ5VUD6 431 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ZNF776Q68DI1 518 aaPredicted RBP6.53□□□□□ -1.36
NECAP1-220ENST00000639841 LINGO4Q6UY18 593 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 NAXDQ8IW45 347 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 FAM76AQ8TAV0 307 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 PPP4R1Q8TF05 950 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 MTBPQ96DY7 904 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 ANKRD36BP1Q96IX9 119 aa6.53□□□□□ -1.36
NECAP1-220ENST00000639841 DUSP16Q9BY84 665 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms