RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ZFP1Q6P2D0 407 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 WDR59Q6PJI9 974 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 TCF24Q7RTU0 167 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 OR4F15Q8NGB8 312 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 OR9G1Q8NH87 305 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 DNAJC19Q96DA6 116 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 TM4SF19Q96DZ7 209 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 MS4A14Q96JA4 679 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 PGLYRP4Q96LB8 373 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 DDX50Q9BQ39 737 aaKnown RBP-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 LSG1Q9H089 658 aaKnown RBP-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 ZCCHC3Q9NUD5 404 aaKnown RBP-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 TAS2R1Q9NYW7 299 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 CNOT2Q9NZN8 540 aaKnown RBP-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 PCDHGB4Q9UN71 923 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 TMEM5Q9Y2B1 443 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 USP16Q9Y5T5 823 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 R4GN34 69 aa-0.89□□□□□ -2.55
LMBR1-222ENST00000638959 DMBT1Q9UGM3 2413 aaPredicted RBP-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 A0A087X0K7 114 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 PRSS37A4D1T9 235 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 H7C417 338 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 PPIHO43447 177 aaKnown RBP-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 DOK2O60496 412 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 SLC25A14O95258 325 aaPredicted RBP-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 JCHAINP01591 159 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 PRPS2P11908 318 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 B4GALT1P15291 398 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 CNR1P21554 472 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 KLK7P49862 253 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 KPNA2P52292 529 aaKnown RBP-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 PLK1P53350 603 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 MPP1Q00013 466 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 REG3AQ06141 175 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 PTK6Q13882 451 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 BMP2KLQ5H9B9 411 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 CST9LP1Q5W188 147 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 HACD2Q6Y1H2 254 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 GGHQ92820 318 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 ZNF625Q96I27 306 aaPredicted RBP-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 ZBED3Q96IU2 234 aaPredicted RBP-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 ACCSQ96QU6 501 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 TSPAN18Q96SJ8 248 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 RETNLBQ9BQ08 111 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 FAM114A2Q9NRY5 505 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 GPR132Q9UNW8 380 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 ZBED9Q6R2W3 1325 aa-0.9□□□□□ -2.55
LMBR1-222ENST00000638959 DSTQ03001 7570 aaKnown RBP-0.91□□□□□ -2.55
LMBR1-222ENST00000638959 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 K7EMT4 169 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 PEX7O00628 323 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 BUB1O43683 1085 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 RPN1P04843 607 aaKnown RBP-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 ZNF30P17039 623 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 CPT2P23786 658 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 SYKP43405 635 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 GYG1P46976 350 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 CXCL12P48061 93 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 SLC34A1Q06495 639 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 ZNF763Q0D2J5 394 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 PPIL2Q13356 520 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 PDIA5Q14554 519 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 CLPPQ16740 277 aaPredicted RBP-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 RILPL1Q5EBL4 403 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 AP1ARQ63HQ0 302 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 PVRIGQ6DKI7 326 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 TMIGD1Q6UXZ0 262 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 STAC2Q6ZMT1 411 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 CENPSQ8N2Z9 138 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 POMGNT2Q8NAT1 580 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 BRSK1Q8TDC3 778 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 C10orf105Q8TEF2 133 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 GLYATL1Q969I3 302 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 MRPL53Q96EL3 112 aaKnown RBP-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 PPM1MQ96MI6 270 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 KLHDC3Q9BQ90 382 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 CHAC1Q9BUX1 264 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 SIAEQ9HAT2 523 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 DDX28Q9NUL7 540 aaKnown RBP-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 MBD2Q9UBB5 411 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 PLA2G4CQ9UP65 541 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 NFASCO94856 1347 aa-0.91□□□□□ -2.56
LMBR1-222ENST00000638959 ROS1P08922 2347 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 C19orf71A6NCJ1 209 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 IFRD1O00458 451 aaPredicted RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 AQP9O43315 295 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 TRIM3O75382 744 aaPredicted RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 BEST1O76090 585 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 CD74P04233 296 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 CHRNGP07510 517 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 ZDHHC11BP0C7U3 371 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 ATP6V1B2P21281 511 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 FMO3P31513 532 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 STIP1P31948 543 aaKnown RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 RFC2P35250 354 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 VDAC2P45880 294 aaPredicted RBP-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 GNPDA1P46926 289 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 CAPZA2P47755 286 aa-0.92□□□□□ -2.56
LMBR1-222ENST00000638959 CHRNB3Q05901 458 aa-0.92□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms