RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 ETFDHQ16134 617 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 PGGHGQ32M88 737 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 SYT14P1Q58G82 188 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 TYW3Q6IPR3 259 aaKnown RBP14.91□□□□□ -0.02
SMN2-216ENST00000638794 TMPPEQ6ZT21 453 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 GALNT5Q7Z7M9 940 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 FAM71CQ8NEG0 241 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 TRMT61AQ96FX7 289 aaKnown RBP14.91□□□□□ -0.02
SMN2-216ENST00000638794 MDFIQ99750 246 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 DPY30Q9C005 99 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 ACER3Q9NUN7 267 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 PCDHGB4Q9UN71 923 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 LIPT1Q9Y234 373 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 ABCA1O95477 2261 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 CUBNO60494 3623 aa14.91□□□□□ -0.02
SMN2-216ENST00000638794 ATRQ13535 2644 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 SULT2B1O00204 365 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 RAMP1O60894 148 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 CPSF4O95639 269 aaKnown RBP14.9□□□□□ -0.02
SMN2-216ENST00000638794 CSNK2A1P68400 391 aaPredicted RBP14.9□□□□□ -0.02
SMN2-216ENST00000638794 PHC1P78364 1004 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 FAPQ12884 760 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 CHI3L2Q15782 390 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 ATAD3BQ5T9A4 648 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 ABLIM2Q6H8Q1 611 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 TNFAIP8L2Q6P589 184 aaPredicted RBP14.9□□□□□ -0.02
SMN2-216ENST00000638794 DNAJC14Q6Y2X3 702 aaPredicted RBP14.9□□□□□ -0.02
SMN2-216ENST00000638794 ZNF100Q8IYN0 542 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 SLC25A43Q8WUT9 341 aaPredicted RBP14.9□□□□□ -0.02
SMN2-216ENST00000638794 XAGE5Q8WWM1 108 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 RAB8BQ92930 207 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 CCDC106Q9BWC9 280 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 C20orf27Q9GZN8 174 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 NPAP1Q9NZP6 1156 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 ADAM21Q9UKJ8 722 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 WDR45Q9Y484 360 aa14.9□□□□□ -0.02
SMN2-216ENST00000638794 IGKV3D-15A0A087WSY6 115 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 PRSS51A0A1B0GVH4 220 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 AGR2O95994 175 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 IGHV4-39P01824 125 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 SERPINE1P05121 402 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 GGT1P19440 569 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 UQCRC2P22695 453 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 IDUAP35475 653 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 ACVR1BP36896 505 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 ABCE1P61221 599 aaKnown RBP14.89□□□□□ -0.03
SMN2-216ENST00000638794 TIMM23BQ5SRD1 257 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 EMBQ6PCB8 327 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 FRRS1Q6ZNA5 592 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 HMGN2P46Q86SG4 172 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 MTDHQ86UE4 582 aaKnown RBP14.89□□□□□ -0.03
SMN2-216ENST00000638794 ZNF563Q8TA94 476 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 ROPN1LQ96C74 230 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 ZG16BQ96DA0 208 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 MUCL1Q96DR8 90 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 DNAJA3Q96EY1 480 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 TRAF4Q9BUZ4 470 aaPredicted RBP14.89□□□□□ -0.03
SMN2-216ENST00000638794 SLCO5A1Q9H2Y9 848 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 CTPS2Q9NRF8 586 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 CISD1Q9NZ45 108 aaKnown RBP14.89□□□□□ -0.03
SMN2-216ENST00000638794 EMC3Q9P0I2 261 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 CHRNA9Q9UGM1 479 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 SLC35A3Q9Y2D2 325 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 FBN1P35555 2871 aaKnown RBP14.89□□□□□ -0.03
SMN2-216ENST00000638794 COL6A5A8TX70 2615 aa14.89□□□□□ -0.03
SMN2-216ENST00000638794 RTTNQ86VV8 2226 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 ZNF716A6NP11 495 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 SHISA9B4DS77 424 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 ABCD4O14678 606 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 ANKRD28O15084 1053 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 NDUFS7O75251 213 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 PGM3O95394 542 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 CD8AP01732 235 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 IGHV3-9P01782 118 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 THBS1P07996 1170 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 GUSBP08236 651 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 MYZAPP0CAP1 466 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 TFPIP10646 304 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 RYKP34925 604 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 APOBEC1P41238 236 aaKnown RBP14.88□□□□□ -0.03
SMN2-216ENST00000638794 KHKP50053 298 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 CDH11P55287 796 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 PLAURQ03405 335 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 SPANXN4Q5MJ08 99 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 ANXA8L1Q5VT79 327 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 AP1ARQ63HQ0 302 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 SAXO2Q658L1 398 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 P2RY8Q86VZ1 359 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 LSRQ86X29 649 aaPredicted RBP14.88□□□□□ -0.03
SMN2-216ENST00000638794 ZNF433Q8N7K0 673 aaPredicted RBP14.88□□□□□ -0.03
SMN2-216ENST00000638794 OIT3Q8WWZ8 545 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 TESCQ96BS2 214 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 NEURL3Q96EH8 262 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 ARL5BQ96KC2 179 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 SORT1Q99523 831 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 TMEM109Q9BVC6 243 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 REG4Q9BYZ8 158 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 SAP130Q9H0E3 1048 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 ALG2Q9H553 416 aa14.88□□□□□ -0.03
SMN2-216ENST00000638794 POLE3Q9NRF9 147 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms