RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 ARL6IP5O75915 188 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 PPP1R3DO95685 299 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 IFNGP01579 166 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 PDGFAP04085 211 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 EPXP11678 715 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 ATF1P18846 271 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 ZNF10P21506 573 aaPredicted RBP18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 DGCR2P98153 550 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 GAS6Q14393 721 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 COL28A1Q2UY09 1125 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 ARHGAP11AQ6P4F7 1023 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 FGF13Q92913 245 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 C1QTNF7Q9BXJ2 289 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 EVA1AQ9H8M9 152 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 HEXA-AS1Q9H8Q6 139 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 OBP2AQ9NY56 170 aa18.58■□□□□ 0.57
SYNGAP1-227ENST00000638142 NPIPA5A0A0B4J1W7 369 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A1B0GVI7 797 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A1W2PQU0 124 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A1W2PRG6 482 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 NPIPA7E9PJI5 369 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 OGG1O15527 345 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 FLRT2O43155 660 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 ATP1B1P05026 303 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 NPIPA8P0DM63 369 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 ENPP2Q13822 863 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 RTL4Q6ZR62 310 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR13C5Q8NGS8 318 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 PEX11GQ96HA9 241 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR2A5Q96R48 311 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF275Q9NSD4 429 aaPredicted RBP18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 UCKL1Q9NWZ5 548 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 FBXL4Q9UKA2 621 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 CAMK2AQ9UQM7 478 aa18.58■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR5K3A6NET4 321 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 GSTZ1O43708 216 aaPredicted RBP18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SNRPBP14678 240 aaKnown RBP18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SLC6A6P31641 620 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 RUNX3Q13761 415 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SLC22A10Q63ZE4 541 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 BTN2A1Q7KYR7 527 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SSX6Q7RTT6 188 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 CDH24Q86UP0 819 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 CMIPQ8IY22 773 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SMAP2Q8WU79 429 aaPredicted RBP18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 THAP4Q8WY91 577 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SMIM19Q96E16 107 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZFP3Q96NJ6 502 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SORCS2Q96PQ0 1159 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR2M4Q96R27 311 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 ACTR6Q9GZN1 396 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 FGF22Q9HCT0 170 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 TBC1D29Q9UFV1 150 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 CTDSPLO15194 276 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 P2RX6O15547 441 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 CXCL3P19876 107 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 NT5EP21589 574 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 ACTA2P62736 377 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 ACTG2P63267 376 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 DYRK1AQ13627 763 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 GSG1Q2KHT4 349 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 FGD2Q7Z6J4 655 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR8H3Q8N146 312 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SYS1Q8N2H4 156 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 OR11H4Q8NGC9 324 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 TMEM168Q9H0V1 697 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SRMSQ9H3Y6 488 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 BRD7Q9NPI1 651 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 POLE3Q9NRF9 147 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 SPATA2Q9UM82 520 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 CLEC4AQ9UMR7 237 aa18.57■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A0B4J2E0 115 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 A0A1B0GX12 115 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 BRINP1O60477 761 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 DNAJB6O75190 326 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 H2AFB2P0C5Z0 115 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 UGT2B7P16662 529 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 SOX9P48436 509 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 ID2Q02363 134 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 CDK5R1Q15078 307 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 LRFN5Q96NI6 719 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 LYRM4Q9HD34 91 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 RABL2AQ9UBK7 228 aaPredicted RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 RABL2BQ9UNT1 228 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 MRPS7Q9Y2R9 242 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 RWDD3Q9Y3V2 267 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 LOC105369274A0A096LPK9 316 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 ANKRD61A6NGH8 418 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 LRRC72A6NJI9 287 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 GATBO75879 557 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 GYPBP06028 91 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 UCHL1P09936 223 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 GDI2P50395 445 aaKnown RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 GBX2P52951 348 aaPredicted RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 PLAURQ03405 335 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 KIR2DS3Q14952 304 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 CDONQ4KMG0 1287 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 ZNF776Q68DI1 518 aaPredicted RBP18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 FIGNL1Q6PIW4 674 aa18.56■□□□□ 0.56
SYNGAP1-227ENST00000638142 ABHD13Q7L211 337 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms