RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 HIST1H1CP16403 213 aaKnown RBP17.38■□□□□ 0.37
CLN5-216ENST00000636780 TP53I3Q53FA7 332 aa17.38■□□□□ 0.37
CLN5-216ENST00000636780 RNASE12Q5GAN4 147 aaKnown RBP17.38■□□□□ 0.37
CLN5-216ENST00000636780 CBLN3Q6UW01 205 aa17.38■□□□□ 0.37
CLN5-216ENST00000636780 GJD3Q8N144 294 aa17.38■□□□□ 0.37
CLN5-216ENST00000636780 SLC38A3Q99624 504 aa17.38■□□□□ 0.37
CLN5-216ENST00000636780 THADAQ6YHU6 1953 aa17.38■□□□□ 0.37
CLN5-216ENST00000636780 A0A0B4J2E0 115 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 A0A1B0GX12 115 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 J3QRE1 110 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 IGHA1P01876 353 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 DRD5P21918 477 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 RAB25P57735 213 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 SHISA6Q6ZSJ9 500 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 VSTM2LQ96N03 204 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 TSSK2Q96PF2 358 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 ATF6BQ99941 703 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 PRTFDC1Q9NRG1 225 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 PNO1Q9NRX1 252 aaKnown RBP17.37■□□□□ 0.37
CLN5-216ENST00000636780 GSTK1Q9Y2Q3 226 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 IER3IP1Q9Y5U9 82 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 IQCMA0A1B0GVH7 501 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 A0A1W2PRG6 482 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 APOA1P02647 267 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 DEFA1P59665 94 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 DEFA3P59666 94 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.37■□□□□ 0.37
CLN5-216ENST00000636780 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.37■□□□□ 0.37
CLN5-216ENST00000636780 SLC7A5P1Q8MH63 180 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 LNX2Q8N448 690 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 BRIX1Q8TDN6 353 aaKnown RBP17.37■□□□□ 0.37
CLN5-216ENST00000636780 STACQ99469 402 aa17.37■□□□□ 0.37
CLN5-216ENST00000636780 CCDC182A6NF36 153 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 PLA2G10O15496 165 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 HMGN1P05114 100 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 PYCR1P32322 319 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 UBXN2BQ14CS0 331 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 MTFR2Q6P444 385 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 CDK20Q8IZL9 346 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 TSTD1Q8NFU3 115 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 OR4C6Q8NH72 309 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 TEX12Q9BXU0 123 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 PRRG3Q9BZD7 231 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 RTN4RQ9BZR6 473 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 GTPBP1O00178 669 aaKnown RBP17.36■□□□□ 0.37
CLN5-216ENST00000636780 RNF13O43567 381 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 PTP4A3O75365 173 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 CCNKO75909 580 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 CSNK1EP49674 416 aaKnown RBP17.36■□□□□ 0.37
CLN5-216ENST00000636780 EFNA3P52797 238 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 IL18Q14116 193 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 CD226Q15762 336 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 DDI2Q5TDH0 399 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 GARNL3Q5VVW2 1013 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 APOOLQ6UXV4 268 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 TTLL10Q6ZVT0 673 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 FAM98AQ8NCA5 519 aaKnown RBP17.36■□□□□ 0.37
CLN5-216ENST00000636780 TSLPQ969D9 159 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 RASD2Q96D21 266 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 NMNAT3Q96T66 252 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 BABAM2Q9NXR7 383 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 SATB2Q9UPW6 733 aa17.36■□□□□ 0.37
CLN5-216ENST00000636780 AKAP8O43823 692 aaKnown RBP17.35■□□□□ 0.37
CLN5-216ENST00000636780 PROS1P07225 676 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 PSMB10P40306 273 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 ZNF85Q03923 595 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 SF3B4Q15427 424 aaKnown RBP eCLIP17.35■□□□□ 0.37
CLN5-216ENST00000636780 CLDN22Q8N7P3 220 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 BCORP1Q8N888 145 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 OR51Q1Q8NH59 317 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 OR5W2Q8NH69 310 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 SMPDL3BQ92485 455 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 DGAT2Q96PD7 388 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 PAIP2BQ9ULR5 123 aaKnown RBP17.35■□□□□ 0.37
CLN5-216ENST00000636780 IGHV1OR15-9A0A0B4J2B8 117 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 TRDV1A0A1B0GX56 115 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 POLR1CO15160 346 aaPredicted RBP17.35■□□□□ 0.37
CLN5-216ENST00000636780 CSTAP01040 98 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 RPS27P42677 84 aaKnown RBP17.35■□□□□ 0.37
CLN5-216ENST00000636780 PRTGQ2VWP7 1150 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 RSBN1Q5VWQ0 802 aaPredicted RBP17.35■□□□□ 0.37
CLN5-216ENST00000636780 BMPERQ8N8U9 685 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 OR10A5Q9H207 317 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 ADGRL4Q9HBW9 690 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 CMC2Q9NRP2 79 aa17.35■□□□□ 0.37
CLN5-216ENST00000636780 TFP02787 698 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 RNH1P13489 461 aaKnown RBP17.34■□□□□ 0.37
CLN5-216ENST00000636780 COPZ1P61923 177 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 ERVK-25P63136 954 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 FAAH2Q6GMR7 532 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 CD200R1LQ6Q8B3 271 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 PAMR1Q6UXH9 720 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 TMPRSS11FQ6ZWK6 438 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 OR8D2Q9GZM6 311 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 TTYH1Q9H313 450 aaPredicted RBP17.34■□□□□ 0.37
CLN5-216ENST00000636780 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 A0A0B4J293 547 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 A0A1B0GVT2 93 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 BLOC1S5-TXNDC5H3BN57 136 aa17.34■□□□□ 0.37
CLN5-216ENST00000636780 RPL4P36578 427 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms