RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 LRIG3Q6UXM1 1119 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 ARL8AQ96BM9 186 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 SLC38A2Q96QD8 506 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 KCNS3Q9BQ31 491 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 KATNB1Q9BVA0 655 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 RACGAP1Q9H0H5 632 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 SLC7A10Q9NS82 523 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 SNX12Q9UMY4 172 aa15.72■□□□□ 0.11
CLN6-212ENST00000636020 hCG_2039718K7EN88 272 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 SULT2B1O00204 365 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 KLF11O14901 512 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 HSPA4LO95757 839 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 BCL10O95999 233 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 PNPP00491 289 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 CRYAAP02489 173 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 HSD17B3P37058 310 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 SLC1A3P43003 542 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 HTR6P50406 440 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 SLC16A1P53985 500 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 HSPB3Q12988 150 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 NAB1Q13506 487 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 QPRTQ15274 297 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 ADRM1Q16186 407 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 KLHL24Q6TFL4 600 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 OR51F2Q8NH61 342 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 C1QTNF3Q9BXJ4 246 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 QRSL1Q9H0R6 528 aaKnown RBP15.71■□□□□ 0.11
CLN6-212ENST00000636020 VPS11Q9H270 941 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 UNKLQ9H9P5 680 aaKnown RBP15.71■□□□□ 0.11
CLN6-212ENST00000636020 MED29Q9NX70 200 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 UPB1Q9UBR1 384 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 PPP2R2CQ9Y2T4 447 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 PTGDR2Q9Y5Y4 395 aa15.71■□□□□ 0.11
CLN6-212ENST00000636020 WNK1Q9H4A3 2382 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 TRAV20A0A0B4J274 112 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 TMEM129A0AVI4 362 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 ESPNB1AK53 854 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 GTPBP1O00178 669 aaKnown RBP15.7■□□□□ 0.1
CLN6-212ENST00000636020 TFP02787 698 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 ALOX5P09917 674 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 GAAP10253 952 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 CLCQ05315 142 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 TIGD2Q4W5G0 525 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 EXOSC6Q5RKV6 272 aaKnown RBP15.7■□□□□ 0.1
CLN6-212ENST00000636020 C1QL2Q7Z5L3 287 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 CARM1Q86X55 608 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 COX18Q8N8Q8 333 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 OR5W2Q8NH69 310 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 OTUB1Q96FW1 271 aaPredicted RBP15.7■□□□□ 0.1
CLN6-212ENST00000636020 C16orf58Q96GQ5 468 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 BOD1Q96IK1 185 aa15.7■□□□□ 0.1
CLN6-212ENST00000636020 DDX28Q9NUL7 540 aaKnown RBP15.7■□□□□ 0.1
CLN6-212ENST00000636020 H3BNH8 94 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 MPGP29372 298 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 POU6F2P78424 691 aaPredicted RBP15.69■□□□□ 0.1
CLN6-212ENST00000636020 IL1RL1Q01638 556 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 NAAAQ02083 359 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 RASA2Q15283 850 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 HIKESHIQ53FT3 197 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.69■□□□□ 0.1
CLN6-212ENST00000636020 TSPO2Q5TGU0 170 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 CASP12Q6UXS9 341 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 C17orf53Q8N3J3 647 aaPredicted RBP15.69■□□□□ 0.1
CLN6-212ENST00000636020 RFWD2Q8NHY2 731 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 PIGXQ8TBF5 258 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 METTL6Q8TCB7 284 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 MS4A4EQ96PG1 132 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 BTBD2Q9BX70 525 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 HOXD1Q9GZZ0 328 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 NARFLQ9H6Q4 476 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 G6PC2Q9NQR9 355 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 GIN1Q9NXP7 522 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 TREM2Q9NZC2 230 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 WNK2Q9Y3S1 2297 aa15.69■□□□□ 0.1
CLN6-212ENST00000636020 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 WNT9BO14905 357 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 STX2P32856 288 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 GPC1P35052 558 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 GPR6P46095 362 aaPredicted RBP15.68■□□□□ 0.1
CLN6-212ENST00000636020 SERPINB8P50452 374 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 HGFACQ04756 655 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 SYT14P1Q58G82 188 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 ANKRD16Q6P6B7 361 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 ZCCHC12Q6PEW1 402 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 CCDC103Q8IW40 242 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 SLC35F6Q8N357 371 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 BPIFB2Q8N4F0 458 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 NUP37Q8NFH4 326 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 OR4F15Q8NGB8 312 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 ZHX1-C8orf76Q96EF9 292 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 ZNF442Q9H7R0 627 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 OBP2BQ9NPH6 170 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 SERINC1Q9NRX5 453 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 PPIAL4AQ9Y536 164 aa15.68■□□□□ 0.1
CLN6-212ENST00000636020 POM121CA8CG34 1229 aa15.67■□□□□ 0.1
CLN6-212ENST00000636020 SAGP10523 405 aaPredicted RBP15.67■□□□□ 0.1
CLN6-212ENST00000636020 NPR2P20594 1047 aa15.67■□□□□ 0.1
CLN6-212ENST00000636020 HMOX2P30519 316 aa15.67■□□□□ 0.1
CLN6-212ENST00000636020 CALCRP30988 508 aa15.67■□□□□ 0.1
CLN6-212ENST00000636020 THBS4P35443 961 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms