RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 SHC1P29353 583 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 SFTPDP35247 375 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 TIMP3P35625 211 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 SLC1A3P43003 542 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 HTR3AP46098 478 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 KCNJ5P48544 419 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 GSK3BP49841 420 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 COPZ1P61923 177 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 DUSP7Q16829 419 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 RIPPLY2Q5TAB7 128 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 CHMP1BQ7LBR1 199 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 MRGPRGQ86SM5 289 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 ZNF808Q8N4W9 903 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-220ENST00000627371 MBD3L2Q8NHZ7 208 aaPredicted RBP18.26■□□□□ 0.51
PTCD3-220ENST00000627371 RASSF5Q8WWW0 418 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 NSL1Q96IY1 281 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 CTPS2Q9NRF8 586 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 SERINC1Q9NRX5 453 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 NDE1Q9NXR1 346 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 KLHL28Q9NXS3 571 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 GMPR2Q9P2T1 348 aaKnown RBP18.26■□□□□ 0.51
PTCD3-220ENST00000627371 SLC13A4Q9UKG4 626 aa18.26■□□□□ 0.51
PTCD3-220ENST00000627371 SPTAN1Q13813 2472 aaKnown RBP18.26■□□□□ 0.51
PTCD3-220ENST00000627371 A0A0J9YW62 118 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 OPN1LWP04000 364 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 C8BP07358 591 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 AGAP20933 346 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 CD247P20963 164 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 POLR2HP52434 150 aaKnown RBP18.25■□□□□ 0.51
PTCD3-220ENST00000627371 WBP2NLQ6ICG8 309 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 POMZP3Q6PJE2 187 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 TRPM8Q7Z2W7 1104 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 GPR32P1Q8NGA4 272 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 OR10D3Q8NH80 312 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 OR2V1Q8NHB1 315 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 SLC26A7Q8TE54 656 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 SLC25A43Q8WUT9 341 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-220ENST00000627371 ADAM19Q9H013 955 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 PAQR5Q9NXK6 330 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-220ENST00000627371 COQ3Q9NZJ6 369 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 CHRNA9Q9UGM1 479 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 SPIN1Q9Y657 262 aaPredicted RBP18.25■□□□□ 0.51
PTCD3-220ENST00000627371 ICE1Q9Y2F5 2266 aa18.25■□□□□ 0.51
PTCD3-220ENST00000627371 A0A0G2JNJ9 132 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 TNFSF11O14788 317 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 TOXO94900 526 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 LGI1O95970 557 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 CALB2P22676 271 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 TACR3P29371 465 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 CEACAM8P31997 349 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-220ENST00000627371 EIF1AXP47813 144 aaKnown RBP18.24■□□□□ 0.51
PTCD3-220ENST00000627371 ZNF136P52737 540 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 RGS8P57771 180 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-220ENST00000627371 MXRA7P84157 204 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 SLC25A3Q00325 362 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 TMEM176BQ3YBM2 270 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-220ENST00000627371 PDSS1Q5T2R2 415 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 XKRXQ6PP77 449 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 C16orf89Q6UX73 402 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 ADGRG3Q86Y34 549 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 CADM2Q8N3J6 435 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 C9orf106Q8NAJ2 232 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 ATP6V1C2Q8NEY4 427 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 OR10Q1Q8NGQ4 319 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 WNT2BQ93097 391 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 ZNF845Q96IR2 970 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-220ENST00000627371 ARHGDIGQ99819 225 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 KCTD14Q9BQ13 255 aaPredicted RBP18.24■□□□□ 0.51
PTCD3-220ENST00000627371 ADA2Q9NZK5 511 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 Q9UFV3 132 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 TESQ9UGI8 421 aaKnown RBP18.24■□□□□ 0.51
PTCD3-220ENST00000627371 OSGIN1Q9UJX0 560 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 RNF6Q9Y252 685 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 ZNF175Q9Y473 711 aa18.24■□□□□ 0.51
PTCD3-220ENST00000627371 TMED7-TICAM2A0A0A6YYA0 188 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 IFNA14P01570 189 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 IL2RAP01589 272 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 FKBP2P26885 142 aaKnown RBP18.23■□□□□ 0.51
PTCD3-220ENST00000627371 KDELR2P33947 212 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 HOXC5Q00444 222 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 SGCBQ16585 318 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 NRF1Q16656 503 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 LRRC23Q53EV4 343 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-220ENST00000627371 SYT14P1Q58G82 188 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 HBMQ6B0K9 141 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 PLXDC2Q6UX71 529 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 LSMEM1Q8N8F7 131 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 TNIP2Q8NFZ5 429 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 ASB5Q8WWX0 329 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 SDCCAG3Q96C92 435 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 TM9SF2Q99805 663 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 COQ10BQ9H8M1 238 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 TMED7Q9Y3B3 224 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 USP9YO00507 2555 aaPredicted RBP18.23■□□□□ 0.51
PTCD3-220ENST00000627371 PTPN13Q12923 2485 aa18.23■□□□□ 0.51
PTCD3-220ENST00000627371 SLC22A20A6NK97 555 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 HSPB2A8KAH6 182 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 CXCL13O43927 109 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 TGM6O95932 706 aa18.22■□□□□ 0.51
PTCD3-220ENST00000627371 FESP07332 822 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms