RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 PRRG2O14669 202 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 DNAJC8O75937 253 aaPredicted RBP13.28□□□□□ -0.28
PNKP-221ENST00000627317 STAMBPO95630 424 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 EPPINO95925 133 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 ELK4P28324 431 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 ADH6P28332 368 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 ACAA2P42765 397 aaKnown RBP13.28□□□□□ -0.28
PNKP-221ENST00000627317 CASP6P55212 293 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 HOXC5Q00444 222 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 CRYZQ08257 329 aaKnown RBP13.28□□□□□ -0.28
PNKP-221ENST00000627317 CDSNQ15517 529 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 FXNQ16595 210 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 NRF1Q16656 503 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 SLC25A53Q5H9E4 307 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 NHSL2Q5HYW2 709 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 DCST1Q5T197 706 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 ZNF787Q6DD87 383 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 VASNQ6EMK4 673 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 WBP2NLQ6ICG8 309 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 POMZP3Q6PJE2 187 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 NCCRP1Q6ZVX7 275 aaPredicted RBP13.28□□□□□ -0.28
PNKP-221ENST00000627317 GRINAQ7Z429 371 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 CD163Q86VB7 1156 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 MARVELD2Q8N4S9 558 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 ZNF808Q8N4W9 903 aaPredicted RBP13.28□□□□□ -0.28
PNKP-221ENST00000627317 OR5M9Q8NGP3 310 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 POC1BQ8TC44 478 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 PHF10Q8WUB8 498 aaKnown RBP13.28□□□□□ -0.28
PNKP-221ENST00000627317 MCUR1Q96AQ8 359 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 CLPTM1LQ96KA5 538 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 NSMCE2Q96MF7 247 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 NPAS1Q99742 590 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 ZNF559Q9BR84 538 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 PCDHAC1Q9H158 963 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 MUC13Q9H3R2 512 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 RPS6KB2Q9UBS0 482 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 RPS6KA6Q9UK32 745 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 CAMK2AQ9UQM7 478 aa13.28□□□□□ -0.28
PNKP-221ENST00000627317 E9PLN8 166 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 ETV2O00321 342 aaPredicted RBP13.27□□□□□ -0.29
PNKP-221ENST00000627317 NTN1O95631 604 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 PEPDP12955 493 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 AGAP20933 346 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 SLC1A3P43003 542 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 HTR3AP46098 478 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 ZNF136P52737 540 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 GABPB1Q06547 395 aaPredicted RBP13.27□□□□□ -0.29
PNKP-221ENST00000627317 SELENBP1Q13228 472 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 PLEKHM3Q6ZWE6 761 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 CBLL1Q75N03 491 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 CARM1Q86X55 608 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 PM20D2Q8IYS1 436 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 UBQLNLQ8IYU4 475 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 EID3Q8N140 333 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 OR52E4Q8NGH9 312 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 OR10Q1Q8NGQ4 319 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 ZNF524Q96C55 264 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 TIMP4Q99727 224 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 VKORC1Q9BQB6 163 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 TRIM2Q9C040 744 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 TMEM185BQ9H7F4 350 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 GORASP2Q9H8Y8 452 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 SERINC1Q9NRX5 453 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 PRDM4Q9UKN5 801 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 SAMD4AQ9UPU9 718 aaKnown RBP13.27□□□□□ -0.29
PNKP-221ENST00000627317 SH3GLB1Q9Y371 365 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 ZNF337Q9Y3M9 751 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 KLF2Q9Y5W3 355 aaPredicted RBP13.27□□□□□ -0.29
PNKP-221ENST00000627317 SPIN1Q9Y657 262 aaPredicted RBP13.27□□□□□ -0.29
PNKP-221ENST00000627317 AP4B1Q9Y6B7 739 aa13.27□□□□□ -0.29
PNKP-221ENST00000627317 NCOA6Q14686 2063 aaPredicted RBP13.27□□□□□ -0.29
PNKP-221ENST00000627317 DCHS2Q6V1P9 2916 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 FIGNL2A6NMB9 653 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 H0Y3Z8 333 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 SEC14L5O43304 696 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 TNFRSF1BP20333 461 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 APCP25054 2843 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 PSMA4P25789 261 aaKnown RBP13.26□□□□□ -0.29
PNKP-221ENST00000627317 APOBEC1P41238 236 aaKnown RBP13.26□□□□□ -0.29
PNKP-221ENST00000627317 STARP49675 285 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 LHX2P50458 406 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 POLR2HP52434 150 aaKnown RBP13.26□□□□□ -0.29
PNKP-221ENST00000627317 SELENOWP63302 87 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 SRYQ05066 204 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 GTF3C1Q12789 2109 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 IFI44LQ53G44 452 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 C3orf33Q6P1S2 294 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 C3P1Q6ZMU1 363 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 FKBP9P1Q75LS8 142 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 VTCN1Q7Z7D3 282 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 MRGPRGQ86SM5 289 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 LACC1Q8IV20 430 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 MEIOBQ8N635 442 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 ATP6V1C2Q8NEY4 427 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 OR6T1Q8NGN1 323 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 GEMIN6Q8WXD5 167 aaKnown RBP13.26□□□□□ -0.29
PNKP-221ENST00000627317 HSH2DQ96JZ2 352 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 MCHR1Q99705 422 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 LRMDAQ9H2I8 198 aa13.26□□□□□ -0.29
PNKP-221ENST00000627317 TMEM27Q9HBJ8 222 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms