RNA–Protein interactions for RNA: ENST00000624009.3

LINC00963-217, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 663 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-217ENST00000624009 C16orf97H3BN30 126 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF208O43345 1280 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 HNRNPCL1O60812 293 aaKnown RBP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 EDF1O60869 148 aaKnown RBP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 SMNDC1O75940 238 aaKnown RBP eCLIP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 PRKD3O94806 890 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 HNRNPCL4P0DMR1 293 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 SFTPDP35247 375 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 UGT2B10P36537 528 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 CRATP43155 626 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 CSNK2A1P68400 391 aaPredicted RBP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 RGNQ15493 299 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 MAPK11Q15759 364 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 NDUFAF6Q330K2 333 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 LIN52Q52LA3 116 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 SYT14P1Q58G82 188 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 RNF220Q5VTB9 566 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 BEND4Q6ZU67 534 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 PLEKHM3Q6ZWE6 761 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 STK32CQ86UX6 486 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 RFWD2Q8NHY2 731 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 SLC38A5Q8WUX1 472 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 WDR60Q8WVS4 1066 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF524Q96C55 264 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 SPDL1Q96EA4 605 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 POLDIP3Q9BY77 421 aaKnown RBP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 CLEC4MQ9H2X3 399 aaPredicted RBP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 TMEM185BQ9H7F4 350 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 BCO1Q9HAY6 547 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 A4GALTQ9NPC4 353 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 DNAJB12Q9NXW2 375 aaKnown RBP11.12□□□□□ -0.63
LINC00963-217ENST00000624009 KLHL9Q9P2J3 617 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 KLHL13Q9P2N7 655 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 CHRNA9Q9UGM1 479 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 IFT52Q9Y366 437 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 HDGFL3Q9Y3E1 203 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 TESMINQ9Y4I5 508 aa11.12□□□□□ -0.63
LINC00963-217ENST00000624009 TRBV5-3A0A0A0MS03 114 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 A0A1W2PP18 115 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 CLIC1O00299 241 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 CNOT4O95628 575 aaKnown RBP11.11□□□□□ -0.63
LINC00963-217ENST00000624009 PMS2P2O95744 297 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 POU2F1P14859 743 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 ETS2P15036 469 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 SHC1P29353 583 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 AGTR1P30556 359 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 SLC1A3P43003 542 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 PLAURQ03405 335 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 MERTKQ12866 999 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 LARS2Q15031 903 aaKnown RBP11.11□□□□□ -0.63
LINC00963-217ENST00000624009 PDK3Q15120 406 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 DNAJC14Q6Y2X3 702 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-217ENST00000624009 TMPPEQ6ZT21 453 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 FCRLAQ7L513 359 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 DPP10Q8N608 796 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF563Q8TA94 476 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 USB1Q9BQ65 265 aaKnown RBP11.11□□□□□ -0.63
LINC00963-217ENST00000624009 SRXN1Q9BYN0 137 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 CACYBPQ9HB71 228 aaKnown RBP11.11□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF226Q9NYT6 803 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 CCDC167Q9P0B6 97 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF232Q9UNY5 417 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 TRAPPC4Q9Y296 219 aa11.11□□□□□ -0.63
LINC00963-217ENST00000624009 TLN2Q9Y4G6 2542 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 CFAP73A6NFT4 308 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF724A8MTY0 619 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 CASKO14936 926 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 CYTIPO60759 359 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 CYP7B1O75881 506 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 YES1P07947 543 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 ETFAP13804 333 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 GPX2P18283 190 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 CPOXP36551 454 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 POLR2HP52434 150 aaKnown RBP11.1□□□□□ -0.63
LINC00963-217ENST00000624009 SIRPAP78324 504 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 FAM27E3Q08E93 113 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 EPS8Q12929 822 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 TESK1Q15569 626 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 TMEM201Q5SNT2 666 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 MRPL2Q5T653 305 aaKnown RBP11.1□□□□□ -0.63
LINC00963-217ENST00000624009 SLC2A7Q6PXP3 512 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 SPNS3Q6ZMD2 512 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 SSX8Q7RTT4 187 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 OLIG3Q7RTU3 272 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 LURAP1LQ8IV03 231 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 BHLHE22Q8NFJ8 381 aaPredicted RBP11.1□□□□□ -0.63
LINC00963-217ENST00000624009 OR52P1PQ8NH57 321 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 BBS10Q8TAM1 723 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 LINC01560Q8TB33 94 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 PNPT1Q8TCS8 783 aaKnown RBP11.1□□□□□ -0.63
LINC00963-217ENST00000624009 GPATCH1Q9BRR8 931 aaKnown RBP11.1□□□□□ -0.63
LINC00963-217ENST00000624009 HDHD5Q9BXW7 423 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 QRSL1Q9H0R6 528 aaKnown RBP11.1□□□□□ -0.63
LINC00963-217ENST00000624009 OPN3Q9H1Y3 402 aaPredicted RBP11.1□□□□□ -0.63
LINC00963-217ENST00000624009 ZNF385DQ9H6B1 395 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 MED4Q9NPJ6 270 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 SLC25A37Q9NYZ2 338 aa11.1□□□□□ -0.63
LINC00963-217ENST00000624009 IGKV3D-15A0A087WSY6 115 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 UQCRHLA0A096LP55 91 aa11.09□□□□□ -0.63
LINC00963-217ENST00000624009 ADAM11O75078 769 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms