RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 COQ7Q99807 217 aa15□□□□□ -0.01
LDB3-208ENST00000623007 SH3GL3Q99963 347 aa15□□□□□ -0.01
LDB3-208ENST00000623007 TAPBPLQ9BX59 468 aa15□□□□□ -0.01
LDB3-208ENST00000623007 WDR12Q9GZL7 423 aaKnown RBP15□□□□□ -0.01
LDB3-208ENST00000623007 SLC22A11Q9NSA0 550 aa15□□□□□ -0.01
LDB3-208ENST00000623007 PRR23D1E9PI22 279 aaPredicted RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 CSO75390 466 aaKnown RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 LDOC1O95751 146 aaPredicted RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 PRR23D2P0DMB1 279 aaPredicted RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 APEHP13798 732 aaKnown RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 CALRP27797 417 aaKnown RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 SOX6P35712 828 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 ATP6V1E1P36543 226 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 HTR3AP46098 478 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 RAB15P59190 212 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 RNF4P78317 190 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 BDH1Q02338 343 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 ACSM1Q08AH1 577 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 DPY19L2P2Q6ZN68 376 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 DBX2Q6ZNG2 339 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 MEPCEQ7L2J0 689 aaKnown RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 SLCO6A1Q86UG4 719 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 OR52N1Q8NH53 320 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 TMCO6Q96DC7 493 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 DACH2Q96NX9 599 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 SLC24A3Q9HC58 644 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 ATP13A2Q9NQ11 1180 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 HAO2Q9NYQ3 351 aa14.99□□□□□ -0.01
LDB3-208ENST00000623007 CCDC59Q9P031 241 aaKnown RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 GPN3Q9UHW5 284 aaPredicted RBP14.99□□□□□ -0.01
LDB3-208ENST00000623007 VCANP13611 3396 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 KPNA4O00629 521 aaPredicted RBP14.98□□□□□ -0.01
LDB3-208ENST00000623007 ARPC3O15145 178 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 IGHA1P01876 353 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 SPTBP11277 2137 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 ABCD3P28288 659 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 SUMO3P55854 103 aaPredicted RBP14.98□□□□□ -0.01
LDB3-208ENST00000623007 TMEM205Q6UW68 189 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 TMPRSS11AQ6ZMR5 421 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 ATG4DQ86TL0 474 aaPredicted RBP14.98□□□□□ -0.01
LDB3-208ENST00000623007 TMCO5AQ8N6Q1 288 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 ZNF321PQ8N8H1 164 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 OR13C2Q8NGS9 318 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 ZNF563Q8TA94 476 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 GPX7Q96SL4 187 aaPredicted RBP14.98□□□□□ -0.01
LDB3-208ENST00000623007 GTPBP2Q9BX10 602 aaKnown RBP14.98□□□□□ -0.01
LDB3-208ENST00000623007 DCSTAMPQ9H295 470 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 MMP27Q9H306 513 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 NDUFB11Q9NX14 153 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 TNFRSF10DQ9UBN6 386 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 PCDHGA3Q9Y5H0 932 aa14.98□□□□□ -0.01
LDB3-208ENST00000623007 B4E171 279 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 MEN1O00255 615 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 AKAP8O43823 692 aaKnown RBP14.97□□□□□ -0.01
LDB3-208ENST00000623007 OR7A10O76100 309 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 SP9P0CG40 484 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CPEP16870 476 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 GADD45AP24522 165 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 TSPAN7P41732 249 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 VBP1P61758 197 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 ACTC1P68032 377 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 ACTA1P68133 377 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 MC2RQ01718 297 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 LGALS3BPQ08380 585 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 ZNF846Q147U1 533 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 TSTQ16762 297 aaKnown RBP14.97□□□□□ -0.01
LDB3-208ENST00000623007 NIPAL3Q6P499 406 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CPEB2Q7Z5Q1 589 aaKnown RBP14.97□□□□□ -0.01
LDB3-208ENST00000623007 LAPTM4BQ86VI4 370 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CPOQ8IVL8 374 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 KLHL36Q8N4N3 616 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 OR5W2Q8NH69 310 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 TMEM234Q8WY98 164 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 TTC9Q92623 222 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 MRPL48Q96GC5 212 aaKnown RBP14.97□□□□□ -0.01
LDB3-208ENST00000623007 OPALINQ96PE5 141 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 OR5M11Q96RB7 305 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 OSGIN1Q9UJX0 560 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 STUB1Q9UNE7 303 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 GPR52Q9Y2T5 361 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 PCDHGB7Q9Y5F8 929 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 RP1P56715 2156 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CABIN1Q9Y6J0 2220 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 C9J4A7 227 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 IMPA2O14732 288 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 ICOSLGO75144 302 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 NADKO95544 446 aaPredicted RBP14.97□□□□□ -0.01
LDB3-208ENST00000623007 CH25HO95992 272 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 FUT1P19526 365 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 GALP22466 123 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 CCKBRP32239 447 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 MPLP40238 635 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 P2RX1P51575 399 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 MAP2K6P52564 334 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 GAS1P54826 345 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 GPR50Q13585 617 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 LCN1P1Q5VSP4 162 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 PRSS58Q8IYP2 241 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 SLC15A4Q8N697 577 aa14.97□□□□□ -0.01
LDB3-208ENST00000623007 NFAM1Q8NET5 270 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms