RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 MGAT4BQ9UQ53 548 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 LIPT1Q9Y234 373 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 ABCA1O95477 2261 aa10.57□□□□□ -0.72
UPF3B-204ENST00000619445 IGKV3D-15A0A087WSY6 115 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 A0A1W2PNR3 127 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 COL6A5A8TX70 2615 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 SMAD9O15198 467 aaKnown RBP10.56□□□□□ -0.72
UPF3B-204ENST00000619445 RGS16O15492 202 aaPredicted RBP10.56□□□□□ -0.72
UPF3B-204ENST00000619445 UGT2B17O75795 530 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 PMS2P2O95744 297 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 PLAUP00749 431 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 UBTFL6P0CB48 400 aaPredicted RBP10.56□□□□□ -0.72
UPF3B-204ENST00000619445 UQCRBP14927 111 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 GGT1P19440 569 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 COX5AP20674 150 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 ARRB2P32121 409 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 MAGEA8P43361 318 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 VSNL1P62760 191 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 RPS26P62854 115 aaKnown RBP10.56□□□□□ -0.72
UPF3B-204ENST00000619445 PPA1Q15181 289 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 PDCD2Q16342 344 aaPredicted RBP10.56□□□□□ -0.72
UPF3B-204ENST00000619445 NRF1Q16656 503 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 KRT71Q3SY84 523 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 ALKBH2Q6NS38 261 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 GRINAQ7Z429 371 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 MREGQ8N565 214 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 FAM71CQ8NEG0 241 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF563Q8TA94 476 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 XAGE5Q8WWM1 108 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 NEURL3Q96EH8 262 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 KLHDC3Q9BQ90 382 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 SAP130Q9H0E3 1048 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 OR51I1Q9H343 314 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 AKTIPQ9H8T0 292 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.56□□□□□ -0.72
UPF3B-204ENST00000619445 CHRNA9Q9UGM1 479 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 MKLN1Q9UL63 735 aa10.56□□□□□ -0.72
UPF3B-204ENST00000619445 OR5H1A6NKK0 313 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF814B7Z6K7 855 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 FCMRO60667 390 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 EIF1BO60739 113 aaKnown RBP10.55□□□□□ -0.72
UPF3B-204ENST00000619445 DANCRP0C864 163 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 TFPIP10646 304 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 LBPP18428 481 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 CHI3L1P36222 383 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-204ENST00000619445 PGM1P36871 562 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 BSPH1Q075Z2 132 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 VEZF1Q14119 521 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 CHI3L2Q15782 390 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 CLEC12BQ2HXU8 276 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 NDUFAF6Q330K2 333 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 FBXW9Q5XUX1 488 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 SAXO2Q658L1 398 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 ABLIM2Q6H8Q1 611 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 OR7E24Q6IFN5 339 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 KLHL17Q6TDP4 642 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 TMEM108Q6UXF1 575 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 CLECL1Q8IZS7 167 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF619Q8N2I2 560 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 ARFGAP2Q8N6H7 521 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 RAB3IL1Q8TBN0 382 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 APH1AQ96BI3 265 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 ROPN1LQ96C74 230 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 TRIM2Q9C040 744 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 SERHL2Q9H4I8 314 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 PARPBPQ9NWS1 579 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 HAO1Q9UJM8 370 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 ING1Q9UK53 422 aaPredicted RBP10.55□□□□□ -0.72
UPF3B-204ENST00000619445 TRAPPC4Q9Y296 219 aa10.55□□□□□ -0.72
UPF3B-204ENST00000619445 HEATR1Q9H583 2144 aaKnown RBP10.55□□□□□ -0.72
UPF3B-204ENST00000619445 IGHV3-15A0A0B4J1V0 119 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 GOLGA8QA0A0J9YX86 632 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 GOLGA8OA6NCC3 632 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 E9PBE3 544 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 GOLGA8NF8WBI6 632 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 SCN2BO60939 215 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 LYZL6O75951 148 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 PGM3O95394 542 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 H6PDO95479 791 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 TP53P04637 393 aaPredicted RBP10.54□□□□□ -0.72
UPF3B-204ENST00000619445 OR12D1P0DN82 309 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 PTAFRP25105 342 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 PCSK6P29122 969 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 S100A3P33764 101 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 SLC1A6P48664 564 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 SLC16A1P53985 500 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 KCNJ10P78508 379 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 TGFBR3Q03167 851 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 CASP8Q14790 479 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 STK11Q15831 433 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 ZSWIM7Q19AV6 140 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 AGAP6Q5VW22 663 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 TYW3Q6IPR3 259 aaKnown RBP10.54□□□□□ -0.72
UPF3B-204ENST00000619445 OGFOD2Q6N063 350 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 DTX2Q86UW9 622 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 ZNF781Q8N8C0 355 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 HS6ST2Q96MM7 605 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 CCDC115Q96NT0 180 aa10.54□□□□□ -0.72
UPF3B-204ENST00000619445 TRNT1Q96Q11 434 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms