RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 CASP9P55211 416 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 UFM1P61960 85 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 PDK3Q15120 406 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 MAPK14Q16539 360 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 FRRS1Q6ZNA5 592 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ZNF704Q6ZNC4 412 aaPredicted RBP8.6□□□□□ -1.03
TARDBP-218ENST00000617172 LRRC74BQ6ZQY2 392 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ZNF621Q6ZSS3 439 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 NUFIP2Q7Z417 695 aaKnown RBP8.6□□□□□ -1.03
TARDBP-218ENST00000617172 GRINAQ7Z429 371 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 GALNT5Q7Z7M9 940 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 MTDHQ86UE4 582 aaKnown RBP8.6□□□□□ -1.03
TARDBP-218ENST00000617172 WFDC8Q8IUA0 241 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ARFGAP2Q8N6H7 521 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ZNF611Q8N823 705 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ANKRD42Q8N9B4 389 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 TMEM171Q8WVE6 324 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 RAB8BQ92930 207 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 S100PBPQ96BU1 408 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ZNF524Q96C55 264 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ZHX1-C8orf76Q96EF9 292 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 PLPPR2Q96GM1 343 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 HS3ST6Q96QI5 342 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 PSD2Q9BQI7 771 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 TMEM204Q9BSN7 226 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 BDH2Q9BUT1 245 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 CCDC106Q9BWC9 280 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 GSX2Q9BZM3 304 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 CXorf56Q9H5V9 222 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 ESRP2Q9H6T0 727 aaKnown RBP8.6□□□□□ -1.03
TARDBP-218ENST00000617172 NKIRAS1Q9NYS0 192 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 EMC3Q9P0I2 261 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 CHRNA9Q9UGM1 479 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 TRAPPC4Q9Y296 219 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 HDGFL3Q9Y3E1 203 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 GPR45Q9Y5Y3 372 aa8.6□□□□□ -1.03
TARDBP-218ENST00000617172 IGKV3D-15A0A087WSY6 115 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 CENPVL1A0A0U1RR11 272 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 AGAP5A6NIR3 686 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 RFXANKO14593 260 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 GPR171O14626 319 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 HS3ST1O14792 307 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 SMAD9O15198 467 aaKnown RBP8.59□□□□□ -1.03
TARDBP-218ENST00000617172 DIAPH2O60879 1101 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 PMS2P2O95744 297 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 ADAP00813 363 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 ALDOCP09972 364 aaKnown RBP8.59□□□□□ -1.03
TARDBP-218ENST00000617172 TFPIP10646 304 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 UQCRBP14927 111 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 PAX1P15863 534 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 EPHA3P29320 983 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 RYKP34925 604 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 WDR4P57081 412 aaKnown RBP8.59□□□□□ -1.03
TARDBP-218ENST00000617172 CHRNEQ04844 493 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 GSTA3Q16772 222 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 ZSWIM7Q19AV6 140 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 Q5PR19 223 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 ADAM5Q6NVV9 412 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 P2RY8Q86VZ1 359 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 RNF130Q86XS8 419 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 KRTAP1-3Q8IUG1 177 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 ZNF100Q8IYN0 542 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 ZG16BQ96DA0 208 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 MUCL1Q96DR8 90 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 TEX37Q96LM6 180 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 QRSL1Q9H0R6 528 aaKnown RBP8.59□□□□□ -1.03
TARDBP-218ENST00000617172 GSX1Q9H4S2 264 aaPredicted RBP8.59□□□□□ -1.03
TARDBP-218ENST00000617172 WDR55Q9H6Y2 383 aaPredicted RBP8.59□□□□□ -1.03
TARDBP-218ENST00000617172 RMND5AQ9H871 391 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 MANSC1Q9H8J5 431 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 THUMPD1Q9NXG2 353 aaKnown RBP8.59□□□□□ -1.03
TARDBP-218ENST00000617172 CALML5Q9NZT1 146 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 NF1P21359 2839 aa8.59□□□□□ -1.03
TARDBP-218ENST00000617172 IGHV3-15A0A0B4J1V0 119 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF814B7Z6K7 855 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 FAAHO00519 579 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 KLF11O14901 512 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ZNF208O43345 1280 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 EIF1BO60739 113 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 SLC22A3O75751 556 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 DBIP07108 87 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 CD3EP07766 207 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 ZCCHC18P0CG32 403 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 NR2F1P10589 423 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 KITP10721 976 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 IL7RP16871 459 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 SLC1A3P43003 542 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 IDH2P48735 452 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 NME5P56597 212 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 MAGOHP61326 146 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 FUT5Q11128 374 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 CAPRIN1Q14444 709 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 TAB1Q15750 504 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 PDCD4Q53EL6 469 aaKnown RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 TIMM23BQ5SRD1 257 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 NCMAPQ5T1S8 102 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 NXNQ6DKJ4 435 aa8.58□□□□□ -1.04
TARDBP-218ENST00000617172 DNAJC14Q6Y2X3 702 aaPredicted RBP8.58□□□□□ -1.04
TARDBP-218ENST00000617172 MSANTD1Q6ZTZ1 278 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms