RNA–Protein interactions for RNA: ENST00000616614.4

FMR1-216, Transcript of fragile X mental retardation 1, humanhuman

TSL 5

Gene FMR1, Length 1,409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-216ENST00000616614 SF3B4Q15427 424 aaKnown RBP eCLIP28.6■■■□□ 2.171e-6■■□□□ 11.7
FMR1-216ENST00000616614 TMEM176BQ3YBM2 270 aaPredicted RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 KLHL15Q96M94 604 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 ADAM19Q9H013 955 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 OSGIN1Q9UJX0 560 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 PACSIN3Q9UKS6 424 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 MBD3L4A6NDZ8 208 aaPredicted RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 MBD3L3A6NE82 208 aaPredicted RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 MBD3L5A6NJ08 208 aaPredicted RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 TMEM229AB2RXF0 380 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 TACR3P29371 465 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 APOBEC1P41238 236 aaKnown RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 EIF1AXP47813 144 aaKnown RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 EEFSECP57772 596 aaKnown RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 OR10Q1Q8NGQ4 319 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 OR10D3Q8NH80 312 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 OR2V1Q8NHB1 315 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 MBD3L2Q8NHZ7 208 aaPredicted RBP28.6■■■□□ 2.17
FMR1-216ENST00000616614 FIG4Q92562 907 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 NSL1Q96IY1 281 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 ALG2Q9H553 416 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 SPAG4Q9NPE6 437 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 STOML1Q9UBI4 398 aa28.6■■■□□ 2.17
FMR1-216ENST00000616614 LRRK2Q5S007 2527 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 TPST2O60704 377 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 LGI1O95970 557 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 CEACAM8P31997 349 aaPredicted RBP28.59■■■□□ 2.17
FMR1-216ENST00000616614 TIMP3P35625 211 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 SMSP52788 366 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 RIPPLY2Q5TAB7 128 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 ESPNLQ6ZVH7 1005 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 CADM2Q8N3J6 435 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 ZNF808Q8N4W9 903 aaPredicted RBP28.59■■■□□ 2.17
FMR1-216ENST00000616614 SDCCAG3Q96C92 435 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 PSMG3-AS1Q96PY0 264 aa28.59■■■□□ 2.17
FMR1-216ENST00000616614 CXCL13O43927 109 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 HTR2AP28223 471 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 CHMP1BQ7LBR1 199 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 PGAM4Q8N0Y7 254 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 BHLHE22Q8NFJ8 381 aaPredicted RBP28.58■■■□□ 2.17
FMR1-216ENST00000616614 OR4D11Q8NGI4 311 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 WNT2BQ93097 391 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 ARHGDIGQ99819 225 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 COQ10BQ9H8M1 238 aa28.58■■■□□ 2.17
FMR1-216ENST00000616614 DIDO1Q9BTC0 2240 aaKnown RBP28.57■■■□□ 2.16
FMR1-216ENST00000616614 BAHCC1Q9P281 2608 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 TMED7-TICAM2A0A0A6YYA0 188 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 A0A1W2PNR3 127 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 UQCRBP14927 111 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 CCNA2P20248 432 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 KDELR2P33947 212 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 CPOXP36551 454 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 WBP2NLQ6ICG8 309 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 C3orf33Q6P1S2 294 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 LIX1LQ8IVB5 337 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 RNF148Q8N7C7 305 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 OSTF1Q92882 214 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 SERINC1Q9NRX5 453 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 ADA2Q9NZK5 511 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 CHRNA9Q9UGM1 479 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 TMED7Q9Y3B3 224 aa28.57■■■□□ 2.16
FMR1-216ENST00000616614 NCOA6Q14686 2063 aaPredicted RBP28.56■■■□□ 2.16
FMR1-216ENST00000616614 M0R3H8 397 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 SYT5O00445 386 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 CLDN1O95832 211 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 HTR3AP46098 478 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 POLR2HP52434 150 aaKnown RBP28.56■■■□□ 2.16
FMR1-216ENST00000616614 RPS3AP61247 264 aaKnown RBP28.56■■■□□ 2.16
FMR1-216ENST00000616614 PON3Q15166 354 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 HBMQ6B0K9 141 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 XKRXQ6PP77 449 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 TRPM8Q7Z2W7 1104 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 RBM45Q8IUH3 476 aaKnown RBP28.56■■■□□ 2.16
FMR1-216ENST00000616614 FNDC9Q8TBE3 224 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 SRXN1Q9BYN0 137 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 OR11A1Q9GZK7 315 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 DOPEY1Q5JWR5 2465 aa28.56■■■□□ 2.16
FMR1-216ENST00000616614 TMEM72A0PK05 275 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 SLC22A20A6NK97 555 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 B2RBV5 119 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 FESP07332 822 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 C8BP07358 591 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 AGAP20933 346 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 COPZ1P61923 177 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 NPTX1Q15818 432 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 SGCBQ16585 318 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 NRF1Q16656 503 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 SLC26A7Q8TE54 656 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 C3orf49Q96BT1 292 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 KCTD14Q9BQ13 255 aaPredicted RBP28.55■■■□□ 2.16
FMR1-216ENST00000616614 KLHL28Q9NXS3 571 aa28.55■■■□□ 2.16
FMR1-216ENST00000616614 A1L4Q6 167 aa28.54■■■□□ 2.16
FMR1-216ENST00000616614 AQP8O94778 261 aa28.54■■■□□ 2.16
FMR1-216ENST00000616614 CARD18P57730 90 aa28.54■■■□□ 2.16
FMR1-216ENST00000616614 RGS8P57771 180 aaPredicted RBP28.54■■■□□ 2.16
FMR1-216ENST00000616614 FOXF2Q12947 444 aa28.54■■■□□ 2.16
FMR1-216ENST00000616614 SYT14P1Q58G82 188 aa28.54■■■□□ 2.16
FMR1-216ENST00000616614 OR6T1Q8NGN1 323 aa28.54■■■□□ 2.16
FMR1-216ENST00000616614 ARL5BQ96KC2 179 aa28.54■■■□□ 2.16
FMR1-216ENST00000616614 CDRT15Q96T59 188 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms