RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 HNRNPA0Q13151 305 aaKnown RBP17.58■□□□□ 0.4
MMP28-204ENST00000615136 HSDL2Q6YN16 418 aa17.58■□□□□ 0.4
MMP28-204ENST00000615136 GRAMD2AQ8IUY3 354 aa17.58■□□□□ 0.4
MMP28-204ENST00000615136 MVB12AQ96EY5 273 aa17.58■□□□□ 0.4
MMP28-204ENST00000615136 OR1F2PQ96R84 312 aa17.58■□□□□ 0.4
MMP28-204ENST00000615136 DPYSL5Q9BPU6 564 aa17.58■□□□□ 0.4
MMP28-204ENST00000615136 SRRQ9GZT4 340 aa17.58■□□□□ 0.4
MMP28-204ENST00000615136 TPK1Q9H3S4 243 aa17.58■□□□□ 0.4
MMP28-204ENST00000615136 SIDT1Q9NXL6 827 aaKnown RBP17.58■□□□□ 0.4
MMP28-204ENST00000615136 SYNDIG1LA6NDD5 238 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 PATE3B3GLJ2 98 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 ATP6V1G1O75348 118 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 DDAH2O95865 285 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 GUSBP08236 651 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 CLEC2LP0C7M8 214 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 GALNSP34059 522 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 ATP12AP54707 1039 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 CSTF1Q05048 431 aaKnown RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 SELENBP1Q13228 472 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 SHISA6Q6ZSJ9 500 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 RNF113BQ8IZP6 322 aaKnown RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 BBS1Q8NFJ9 593 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 OR4F15Q8NGB8 312 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 OR52N1Q8NH53 320 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 C1GALT1C1Q96EU7 318 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 ZNF578Q96N58 590 aaPredicted RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 ZNF559Q9BR84 538 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 NXF5Q9H1B4 397 aaKnown RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 UBQLN3Q9H347 655 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 HINT3Q9NQE9 182 aaKnown RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 CTSFQ9UBX1 484 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 SERTAD3Q9UJW9 196 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 MMACHCQ9Y4U1 282 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 TECTAO75443 2155 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 LALBAP00709 142 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 GAAP10253 952 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 SDC2P34741 201 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 TPTEP56180 551 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 FABP5Q01469 135 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 GLYR1Q49A26 553 aaPredicted RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 CRTC2Q53ET0 693 aaPredicted RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 ZNF613Q6PF04 617 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 LHFPL3Q86UP9 236 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 GATSQ8NAP1 163 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 SLC38A9Q8NBW4 561 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 PSD4Q8NDX1 1056 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 OR4C6Q8NH72 309 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 SLC2A12Q8TD20 617 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 ZNF721Q8TF20 911 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 NECAB3Q96P71 396 aaPredicted RBP17.57■□□□□ 0.4
MMP28-204ENST00000615136 TM9SF2Q99805 663 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 COQ7Q99807 217 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 MESP1Q9BRJ9 268 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 KATNB1Q9BVA0 655 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 MIXL1Q9H2W2 232 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 OR52D1Q9H346 318 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 TMEM27Q9HBJ8 222 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 SLC22A11Q9NSA0 550 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 TOR4AQ9NXH8 423 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 ZDBF2Q9HCK1 2354 aa17.57■□□□□ 0.4
MMP28-204ENST00000615136 TRDV1A0A1B0GX56 115 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 A0A1B0GX78 115 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 UNC119BA6NIH7 251 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 LRRTM2O43300 516 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 SOX30O94993 753 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 TIAF1O95411 115 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 IGKV3-11P04433 115 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 TBXA2RP21731 343 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 CCL7P80098 99 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 ZMAT1Q5H9K5 638 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 ARHGAP40Q5TG30 622 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 TMEM71Q6P5X7 295 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 KIRREL2Q6UWL6 708 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 THSD4Q6ZMP0 1018 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 MED25Q71SY5 747 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 KLHL36Q8N4N3 616 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 SYT14Q8NB59 555 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 OR13C2Q8NGS9 318 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 FANK1Q8TC84 345 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 BPIFA2Q96DR5 249 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 PELOQ9BRX2 385 aaKnown RBP17.56■□□□□ 0.4
MMP28-204ENST00000615136 G6PC3Q9BUM1 346 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 NRSN2Q9GZP1 204 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 FN3KQ9H479 309 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.56■□□□□ 0.4
MMP28-204ENST00000615136 GSTK1Q9Y2Q3 226 aa17.56■□□□□ 0.4
MMP28-204ENST00000615136 A0A0C4DFX4 3053 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 TCRBV16S1A1N1A0A5B0 115 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 TMEM221A6NGB7 291 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 J3QRE1 110 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 GNB5O14775 395 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 AKAP8O43823 692 aaKnown RBP17.55■□□□□ 0.4
MMP28-204ENST00000615136 SSX4O60224 188 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 CFIP05156 583 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 COX15Q7KZN9 410 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 AKAP14Q86UN6 197 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 KMT5CQ86Y97 462 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 GID4Q8IVV7 300 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 PRR22Q8IZ63 422 aa17.55■□□□□ 0.4
MMP28-204ENST00000615136 OR8H2Q8N162 312 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms