RNA–Protein interactions for RNA: ENST00000613246.4

PTPRJ-207, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRJ, Length 7,851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-207ENST00000613246 ZNF689Q96CS4 500 aaPredicted RBP17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 ZDHHC18Q9NUE0 388 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 RARRES3Q9UL19 164 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 SETD1AO15047 1707 aaKnown RBP17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 PTBP3O95758 552 aaKnown RBP17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 HNF1AP20823 631 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 LAP3P28838 519 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 CXCR4P61073 352 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 LY6G5CQ5SRR4 150 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 KLHDC8AQ8IYD2 350 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 BRIX1Q8TDN6 353 aaKnown RBP17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 PBX4Q9BYU1 374 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 MCOLN1Q9GZU1 580 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 POPDC3Q9HBV1 291 aa17.51■□□□□ 0.39
PTPRJ-207ENST00000613246 LTBQ06643 244 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 OPCMLQ14982 345 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 PROX2Q3B8N5 592 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ACSM3Q53FZ2 586 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 OR52E8Q6IFG1 317 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ZNF761Q86XN6 746 aaPredicted RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 INPP5KQ9BT40 448 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ZNFX1Q9P2E3 1918 aaKnown RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 PDZD11Q5EBL8 140 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 PIP5KL1Q5T9C9 394 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 METAP1DQ6UB28 335 aaPredicted RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 SERINC5Q86VE9 423 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ZNF596Q8TC21 504 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 APOBEC3BQ9UH17 382 aaKnown RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 SVILO95425 2214 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 WNT7AO00755 349 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 SLC6A8P48029 635 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 MPEG1Q2M385 716 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 RFPL4BQ6ZWI9 263 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 SECTM1Q8WVN6 248 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 CMSS1Q9BQ75 279 aaKnown RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 UQCC2Q9BRT2 126 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 hCG_1809904A0A1W2PP81 198 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 A0A1W2PPE2 198 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 A0A1W2PR64 198 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 A0A1W2PRV1 198 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 USP2O75604 605 aaPredicted RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 HHEXQ03014 270 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 INCA1Q0VD86 236 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 RPL7L1Q6DKI1 246 aaKnown RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 LARP4Q71RC2 724 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 SSX7Q7RTT5 188 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ADGRF3Q8IZF5 1079 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ARNT2Q9HBZ2 717 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 HEATR5BQ9P2D3 2071 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ZFP92A6NM28 416 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 KDM4EB2RXH2 506 aaPredicted RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 ZNF207O43670 478 aaKnown RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 OLFM2O95897 454 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 SLC25A11Q02978 314 aaKnown RBP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 INIPQ9NRY2 104 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 SLC35D1Q9NTN3 355 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 GAB2Q9UQC2 676 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 IER3IP1Q9Y5U9 82 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 PPP3CBP16298 524 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 GGT1P19440 569 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 CREBZFQ9NS37 354 aa17.5■□□□□ 0.39
PTPRJ-207ENST00000613246 KRBA1A5PL33 1030 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 RNGTTO60942 597 aaKnown RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 VNN1O95497 513 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 CDK4P11802 303 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 HOXD12P35452 270 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 EMP3P54852 163 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 SMIM12Q96EX1 92 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 WDR92Q96MX6 357 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 WWTR1Q9GZV5 400 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 SSUH2Q9Y2M2 353 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 FUOMA2VDF0 154 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 TP53P04637 393 aaPredicted RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 PAFAH1B3Q15102 231 aaKnown RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 SLC16A5O15375 505 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 OR2J3O76001 311 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 VAMP3Q15836 100 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 ZNF582Q96NG8 517 aaPredicted RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 ZNF317Q96PQ6 595 aaPredicted RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 ARPC5LQ9BPX5 153 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 EXO1Q9UQ84 846 aaKnown RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 GPR19Q15760 415 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 CNKSR3Q6P9H4 555 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 LSMEM2Q8N112 164 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 DIP2CQ9Y2E4 1556 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 A0A087WZY1 265 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 KLF11O14901 512 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 NDUFB2O95178 105 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 TMEM19Q96HH6 336 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 FGF18O76093 207 aa17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 RANGRFQ9HD47 186 aaPredicted RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 TMEM184BQ9Y519 407 aaPredicted RBP17.49■□□□□ 0.39
PTPRJ-207ENST00000613246 TNFRSF10AO00220 468 aa17.48■□□□□ 0.39
PTPRJ-207ENST00000613246 SDC3O75056 442 aa17.48■□□□□ 0.39
PTPRJ-207ENST00000613246 OR2C1O95371 312 aa17.48■□□□□ 0.39
PTPRJ-207ENST00000613246 GNB1P62873 340 aa17.48■□□□□ 0.39
PTPRJ-207ENST00000613246 TATDN3Q17R31 274 aa17.48■□□□□ 0.39
PTPRJ-207ENST00000613246 ALKAL2Q6UX46 152 aa17.48■□□□□ 0.39
PTPRJ-207ENST00000613246 Q6ZVL8 140 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms