RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 SOX1O00570 391 aaPredicted RBP12.51□□□□□ -0.41
NEK3-205ENST00000610828 DYRK3O43781 588 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 CLUP10909 449 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 FOLR1P15328 257 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 GLB1P16278 677 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 SLC6A6P31641 620 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 CSF2RBP32927 897 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 DMWDQ09019 674 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 CRMP1Q14194 572 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 WDR45BQ5MNZ6 344 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 ZNF362Q5T0B9 420 aaPredicted RBP12.51□□□□□ -0.41
NEK3-205ENST00000610828 LINC00114Q6XXX2 140 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 LAX1Q8IWV1 398 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 ZSCAN1Q8NBB4 408 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 KISS1RQ969F8 398 aaPredicted RBP12.51□□□□□ -0.41
NEK3-205ENST00000610828 ART5Q96L15 291 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 OR1F2PQ96R84 312 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 TEAD3Q99594 435 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 LRRN3Q9H3W5 708 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 MMACHCQ9Y4U1 282 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 EML5Q05BV3 1969 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 COL6A3P12111 3177 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 GYPBP06028 91 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 MRPL3P09001 348 aaKnown RBP12.51□□□□□ -0.41
NEK3-205ENST00000610828 PEPDP12955 493 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 HK1P19367 917 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 GPR143P51810 404 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 FHL1Q13642 323 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 KLHL26Q53HC5 615 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 TMPRSS11AQ6ZMR5 421 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 TMEM99Q8N816 258 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 OR10H4Q8NGA5 316 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 RNF31Q96EP0 1072 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 MVB12AQ96EY5 273 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 NDC1Q9BTX1 674 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 ALG8Q9BVK2 526 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 JAM3Q9BX67 310 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 HDHD5Q9BXW7 423 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 NXF5Q9H1B4 397 aaKnown RBP12.51□□□□□ -0.41
NEK3-205ENST00000610828 FBXL4Q9UKA2 621 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 BAIAP2Q9UQB8 552 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 UGT2A1Q9Y4X1 527 aa12.51□□□□□ -0.41
NEK3-205ENST00000610828 A0A087WUJ7 227 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 IQCMA0A1B0GVH7 501 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 DAPL1A0PJW8 107 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 K7ESF4 209 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 CCR4P51679 360 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 ACSM1Q08AH1 577 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 VWA2Q5GFL6 755 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 PRSS58Q8IYP2 241 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 LRRC17Q8N6Y2 441 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 ZNF527Q8NB42 609 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 PHOSPHO1Q8TCT1 267 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 DNAJA4Q8WW22 397 aaPredicted RBP12.5□□□□□ -0.41
NEK3-205ENST00000610828 HTRA1Q92743 480 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 CLDN23Q96B33 292 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 ERMAPQ96PL5 475 aaPredicted RBP12.5□□□□□ -0.41
NEK3-205ENST00000610828 GAL3ST4Q96RP7 486 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 DCLRE1CQ96SD1 692 aaKnown RBP12.5□□□□□ -0.41
NEK3-205ENST00000610828 UBQLN4Q9NRR5 601 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 HLA-DPB1P04440 258 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 FGF9P31371 208 aaPredicted RBP12.5□□□□□ -0.41
NEK3-205ENST00000610828 RORAP35398 523 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 PPICP45877 212 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 PSPHP78330 225 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 GPLD1P80108 840 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 CD226Q15762 336 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 C1orf189Q5VU69 101 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 ARHGAP11AQ6P4F7 1023 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 CD200R1LQ6Q8B3 271 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 D2HGDHQ8N465 521 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 ATP6V1C2Q8NEY4 427 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 SLC2A12Q8TD20 617 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 ASB15Q8WXK1 588 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 SGTBQ96EQ0 304 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 SLC46A1Q96NT5 459 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 KATNB1Q9BVA0 655 aa12.5□□□□□ -0.41
NEK3-205ENST00000610828 DUSP15Q9H1R2 295 aaPredicted RBP12.5□□□□□ -0.41
NEK3-205ENST00000610828 TRDV1A0A1B0GX56 115 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 CCDC182A6NF36 153 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 SCDO00767 359 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 NDUFB2O95178 105 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 IFNGP01579 166 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 GIMD1P0DJR0 217 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 FBLP22087 321 aaKnown RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 INSL4Q14641 139 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 ARMC4Q5T2S8 1044 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 PRR22Q8IZ63 422 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 CARFQ8N187 725 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 SDR9C7Q8NEX9 313 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 OR5M3Q8NGP4 307 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 C3orf49Q96BT1 292 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 ZNF304Q9HCX3 659 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 C14orf119Q9NWQ9 140 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 PLEKHB1Q9UF11 243 aaPredicted RBP12.49□□□□□ -0.41
NEK3-205ENST00000610828 CMAHPQ9Y471 501 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 RP1P56715 2156 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 IGKV3D-11A0A0A0MRZ8 115 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 GABRPO00591 440 aa12.49□□□□□ -0.41
NEK3-205ENST00000610828 CASKO14936 926 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms