RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 NRG3P56975 720 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 SIM1P81133 766 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-219ENST00000608720 DCST2Q5T1A1 773 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 MRPL2Q5T653 305 aaKnown RBP13.56□□□□□ -0.24
CTCFL-219ENST00000608720 FAM27D1Q5T7N8 215 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 KRT74Q7RTS7 529 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 LURAP1LQ8IV03 231 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 OR4N5Q8IXE1 308 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 OR4C6Q8NH72 309 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 PAWRQ96IZ0 340 aaKnown RBP13.56□□□□□ -0.24
CTCFL-219ENST00000608720 TMEM106CQ9BVX2 250 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 SHARPINQ9H0F6 387 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 GHITMQ9H3K2 345 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 HAO2Q9NYQ3 351 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 COQ3Q9NZJ6 369 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 CXXC1Q9P0U4 656 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-219ENST00000608720 BAIAP2Q9UQB8 552 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 SIGLEC7Q9Y286 467 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 A0A1B0GVI7 797 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 CDHR4A6H8M9 788 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 B3GALT2O43825 422 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 SMIM10L1P0DMW3 83 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 CPMP14384 443 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 CBX5P45973 191 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 ACTC1P68032 377 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 ACTA1P68133 377 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 PITPNAQ00169 270 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 ZNF85Q03923 595 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 AMZ1Q400G9 498 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 SLC36A2Q495M3 483 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 ACSM3Q53FZ2 586 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 TRMT12Q53H54 448 aaKnown RBP13.56□□□□□ -0.24
CTCFL-219ENST00000608720 DMKNQ6E0U4 476 aaPredicted RBP13.56□□□□□ -0.24
CTCFL-219ENST00000608720 THSD4Q6ZMP0 1018 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 SMPDL3BQ92485 455 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 PMM1Q92871 262 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 PHF21AQ96BD5 680 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 SMIM10Q96HG1 83 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 APOOQ9BUR5 198 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 GSX2Q9BZM3 304 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 ADGRL4Q9HBW9 690 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 OBP2AQ9NY56 170 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 FBXL21Q9UKT6 434 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 ZMIZ1Q9ULJ6 1067 aa13.56□□□□□ -0.24
CTCFL-219ENST00000608720 MYO10Q9HD67 2058 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 TRAV1-2A0A0B4J238 106 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 A0A1B0GVC2 190 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 URADA6NGE7 173 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 A6NIN4 97 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 PTP4A3O75365 173 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 SERPINA3P01011 423 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 MRPL3P09001 348 aaKnown RBP13.55□□□□□ -0.24
CTCFL-219ENST00000608720 SAGP10523 405 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-219ENST00000608720 PEPDP12955 493 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 ZNF3P17036 446 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 RAB3BP20337 219 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 SLC2A5P22732 501 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 GJA4P35212 333 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 DBPQ10586 325 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-219ENST00000608720 POU4F2Q12837 409 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 RUNX2Q13950 521 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 ZNF273Q14593 569 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 EXOSC6Q5RKV6 272 aaKnown RBP13.55□□□□□ -0.24
CTCFL-219ENST00000608720 FBXO42Q6P3S6 717 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 PSRC1Q6PGN9 363 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-219ENST00000608720 TFAP2EQ6VUC0 442 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 LUZP2Q86TE4 346 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 OR13C2Q8NGS9 318 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 SLC22A18Q96BI1 424 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 TM4SF19Q96DZ7 209 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 WBP1Q96G27 269 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 PGLYRP3Q96LB9 341 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 OR2M2Q96R28 347 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 SLC17A9Q9BYT1 436 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 TMEM168Q9H0V1 697 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 DUSP22Q9NRW4 184 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 C14orf105Q9NVL8 296 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 COPZ2Q9P299 210 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 ZNF175Q9Y473 711 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 MAB21L2Q9Y586 359 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 KLF2Q9Y5W3 355 aaPredicted RBP13.55□□□□□ -0.24
CTCFL-219ENST00000608720 PRUNE2Q8WUY3 3088 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 NUMA1Q14980 2115 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 A8MUA0 341 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 UBL3O95164 117 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 TCRBP04435 133 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 ACVR1BP36896 505 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 EPHA4P54764 986 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 OR12D2P58182 307 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 RUNX3Q13761 415 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 SLC25A35Q3KQZ1 300 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 DEFB134Q4QY38 66 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 C2orf27AQ580R0 203 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 FHL5Q5TD97 284 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 ZNF613Q6PF04 617 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 DGLUCYQ7Z3D6 616 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 TOMM5Q8N4H5 51 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 COX18Q8N8Q8 333 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 CDRT4Q8N9R6 151 aa13.55□□□□□ -0.24
CTCFL-219ENST00000608720 C17orf47Q8NEP4 570 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms