RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ZNF17P17021 662 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 SHC1P29353 583 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 MAGEA2P43356 314 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TDGF1P3P51864 188 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 POLR2HP52434 150 aaKnown RBP6.94□□□□□ -1.3
MSH6-211ENST00000606499 CDH12P55289 794 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 DLX5P56178 289 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TAS2R41P59536 307 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 CHRNB3Q05901 458 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 SLC10A1Q14973 349 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 C3AR1Q16581 482 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 ALG10BQ5I7T1 473 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 ZNF613Q6PF04 617 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 ULK3Q6PHR2 472 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 WDR88Q6ZMY6 472 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 GRINAQ7Z429 371 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 GDF7Q7Z4P5 450 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 ATG4DQ86TL0 474 aaPredicted RBP6.94□□□□□ -1.3
MSH6-211ENST00000606499 P3H2Q8IVL5 708 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 OFCC1Q8IZS5 231 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 ATP6V1C2Q8NEY4 427 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 NEIL3Q8TAT5 605 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 FAR1Q8WVX9 515 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 PYDC1Q8WXC3 89 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TMEM234Q8WY98 164 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 SMPDL3BQ92485 455 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 DTNBP1Q96EV8 351 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 DNAJA3Q96EY1 480 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 SLC41A3Q96GZ6 507 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 MRGPRX4Q96LA9 322 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 PRRC1Q96M27 445 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 SFXN2Q96NB2 322 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 SLX1AQ9BQ83 275 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 PIGQQ9BRB3 760 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 CHID1Q9BWS9 393 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 ADAM19Q9H013 955 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 LDAHQ9H6V9 325 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 EXO5Q9H790 373 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TMEM27Q9HBJ8 222 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 ACKR4Q9NPB9 350 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 IL1RAPQ9NPH3 570 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 PLSCR2Q9NRY7 297 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 MAN2C1Q9NTJ4 1040 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 VNN3Q9NY84 501 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 SPRR3Q9UBC9 169 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 RIMS3Q9UJD0 308 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 METRNQ9UJH8 293 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 OSGIN1Q9UJX0 560 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 TMED7Q9Y3B3 224 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 MRPS18CQ9Y3D5 142 aaKnown RBP6.94□□□□□ -1.3
MSH6-211ENST00000606499 ZNF337Q9Y3M9 751 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 RELNP78509 3460 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 CNTRLQ7Z7A1 2325 aa6.94□□□□□ -1.3
MSH6-211ENST00000606499 IGKV1D-42A0A075B6H8 117 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 A0A1B0GTH9 108 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 TMEM72A0PK05 275 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 ZC3H12DA2A288 527 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 ELOA3DA6NLF2 546 aaPredicted RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 H0YC42 278 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 SEC14L5O43304 696 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 CHP2O43745 196 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 SUSD5O60279 629 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 TIPRLO75663 272 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 OR5F1O95221 314 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 UMPSP11172 480 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 ITGA2P17301 1181 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 BMP7P18075 431 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 RHCEP18577 417 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 POU3F2P20265 443 aaPredicted RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 CHMP24386 653 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 CXCR1P25024 350 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 ELK4P28324 431 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 SLC7A1P30825 629 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 RRM2P31350 389 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 SFTPDP35247 375 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 APOBEC1P41238 236 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 EIF1P41567 113 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 STARP49675 285 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 LHX2P50458 406 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 TPD52P55327 224 aaPredicted RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 CLDN20P56880 219 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 SPIBQ01892 262 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 CRYZQ08257 329 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 C19orf57Q0VDD7 668 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 PPP1R8Q12972 351 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 SELENBP1Q13228 472 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 ELOA3BQ3SY89 546 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 GLYR1Q49A26 553 aaPredicted RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 FGD3Q5JSP0 725 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 SWT1Q5T5J6 900 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 C3orf33Q6P1S2 294 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 PIWIL3Q7Z3Z3 882 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 FGD2Q7Z6J4 655 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 ZNF605Q86T29 641 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 GGNQ86UU5 652 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 CYP4Z1Q86W10 505 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 ADGRG3Q86Y34 549 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 NKAIN4Q8IVV8 208 aa6.93□□□□□ -1.3
MSH6-211ENST00000606499 CHERPQ8IWX8 916 aaKnown RBP6.93□□□□□ -1.3
MSH6-211ENST00000606499 UBQLNLQ8IYU4 475 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms