RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 SOD2P04179 222 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 FOSL2P15408 326 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 BDKRB1P46663 353 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 GABRA4P48169 554 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 CDK8P49336 464 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 HTR4Q13639 388 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 RAB11BQ15907 218 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 TIGD5Q53EQ6 642 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 KHDC3LQ587J8 217 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 PLAC9Q5JTB6 97 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 YOD1Q5VVQ6 348 aaPredicted RBP8.25□□□□□ -1.09
COMMD3-215ENST00000602574 RNLSQ5VYX0 342 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 MRNIPQ6NTE8 343 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 BIVMQ86UB2 503 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 NRROSQ86YC3 692 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 FAM126BQ8IXS8 530 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 CD200R1Q8TD46 325 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 MITD1Q8WV92 249 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 CRYGNQ8WXF5 182 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 EDAQ92838 391 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 HRASLS5Q96KN8 279 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 AIF1LQ9BQI0 150 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 NRIP2Q9BQI9 281 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 FICDQ9BVA6 458 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 LGR4Q9BXB1 951 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 GABARAPL3Q9BY60 117 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 SPRTNQ9H040 489 aaPredicted RBP8.25□□□□□ -1.09
COMMD3-215ENST00000602574 SIK2Q9H0K1 926 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 C20orf85Q9H1P6 137 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 ZMAT3Q9HA38 289 aaKnown RBP8.25□□□□□ -1.09
COMMD3-215ENST00000602574 LMAN1LQ9HAT1 526 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 HMX1Q9NP08 348 aaPredicted RBP8.25□□□□□ -1.09
COMMD3-215ENST00000602574 MID1IP1Q9NPA3 183 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 UBE2TQ9NPD8 197 aaPredicted RBP8.25□□□□□ -1.09
COMMD3-215ENST00000602574 MMP26Q9NRE1 261 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 SLC2A9Q9NRM0 540 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 COMMD3Q9UBI1 195 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 CD84Q9UIB8 345 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 A4GNTQ9UNA3 340 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 COLEC10Q9Y6Z7 277 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 SPACA6W5XKT8 324 aa8.25□□□□□ -1.09
COMMD3-215ENST00000602574 A0A096LPI6 279 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 LOC105369274A0A096LPK9 316 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 IGKV6D-41A0A0C4DH26 115 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 A0A0D9SG52 128 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 KIR2DL5BA0A0G2JN68 375 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 KIR2DL5BA0A0G2JPC4 375 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SMCO3A2RU48 225 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CPED1A4D0V7 1026 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PROB1E7EW31 1015 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SMIM22K7EJ46 135 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ACKR2O00590 384 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TOXO94900 526 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 IL18BPO95998 194 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 OR5AC1P0C628 307 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PF4V1P10720 104 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PIPP12273 146 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 UNGP13051 313 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 IRF2P14316 349 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CPT2P23786 658 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 BRS3P32247 399 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 WNT3P56703 355 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CSNK1G2P78368 415 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF543Q08ER8 600 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SLC10A7Q0GE19 358 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 IL18Q14116 193 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 HNRNPA1L2Q32P51 320 aaKnown RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ATG9BQ674R7 924 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TANGO2Q6ICL3 276 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 DEF8Q6ZN54 512 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 FAM83HQ6ZRV2 1179 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 C6orf120Q7Z4R8 191 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 LINC01551Q86U37 167 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 OR4N4Q8N0Y3 316 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 KIR2DL5AQ8N109 375 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 BPIFB2Q8N4F0 458 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PROKR2Q8NFJ6 384 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 OR9Q1Q8NGQ5 310 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 RPLP0P6Q8NHW5 317 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TMEM234Q8WY98 164 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PNPLA2Q96AD5 504 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TSPAN17Q96FV3 270 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 OR2M4Q96R27 311 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SLITRK2Q9H156 845 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 CRISPLD1Q9H336 500 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 IPPKQ9H8X2 491 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 HHATLQ9HCP6 504 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 ZNF701Q9NV72 531 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 DOK5Q9P104 306 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 RPS6KB2Q9UBS0 482 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 SUSD2Q9UGT4 822 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 FOXD3Q9UJU5 478 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TIMM10BQ9Y5J6 103 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 AHDC1Q5TGY3 1603 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 COL5A3P25940 1745 aaPredicted RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 OR2W5A6NFC9 320 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 PHOX2AO14813 284 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 NDUFS3O75489 264 aa8.24□□□□□ -1.09
COMMD3-215ENST00000602574 EEDO75530 441 aaKnown RBP8.24□□□□□ -1.09
COMMD3-215ENST00000602574 TOMM40O96008 361 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms