RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 PIN1Q13526 163 aaPredicted RBP10.76□□□□□ -0.69
VRK3-223ENST00000601341 SYT14P1Q58G82 188 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 CT45A2Q5DJT8 189 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 STEAP3Q658P3 488 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 PAPD4Q6PIY7 484 aaKnown RBP10.76□□□□□ -0.69
VRK3-223ENST00000601341 RASSF6Q6ZTQ3 369 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 CLDN22Q8N7P3 220 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 TCEANCQ8N8B7 351 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 OR6T1Q8NGN1 323 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
VRK3-223ENST00000601341 PMM1Q92871 262 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 TXNDC15Q96J42 360 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 COQ7Q99807 217 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 SLC30A2Q9BRI3 323 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 MED18Q9BUE0 208 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 TEX12Q9BXU0 123 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 ZNF350Q9GZX5 532 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 EVA1AQ9H8M9 152 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 CACYBPQ9HB71 228 aaKnown RBP10.76□□□□□ -0.69
VRK3-223ENST00000601341 KLHL28Q9NXS3 571 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 SLC13A4Q9UKG4 626 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 PPIEQ9UNP9 301 aaKnown RBP10.76□□□□□ -0.69
VRK3-223ENST00000601341 GPR55Q9Y2T6 319 aaPredicted RBP10.76□□□□□ -0.69
VRK3-223ENST00000601341 OR10H1Q9Y4A9 318 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 PCDHGB6Q9Y5F9 930 aa10.76□□□□□ -0.69
VRK3-223ENST00000601341 LOC102723996A0A087X1L8 192 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 C2orf92A0A1B0GVN3 265 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 GXYLT2A0PJZ3 443 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 TPST2O60704 377 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 GPX5O75715 221 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 KCNK2O95069 426 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 EPPINO95925 133 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 IGHEP01854 428 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 ALPPP05187 535 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 GUSBP08236 651 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 CPEP16870 476 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 RBMS1P29558 406 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 CRYBB2P43320 205 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 GPR143P51810 404 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 RPS15P62841 145 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 GABREP78334 506 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 HLA-DQA1Q5Y7H0 255 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 SLC27A4Q6P1M0 643 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 FRRS1Q6ZNA5 592 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 SLC29A4Q7RTT9 530 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 RBM45Q8IUH3 476 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 NLGN4XQ8N0W4 816 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 SLC34A3Q8N130 599 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 NFAM1Q8NET5 270 aaPredicted RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 NLGN4YQ8NFZ3 816 aaPredicted RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 TEX47Q8TBZ9 253 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 TMEM163Q8TC26 289 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 CT55Q8WUE5 264 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 EFHD2Q96C19 240 aaPredicted RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 SLC38A2Q96QD8 506 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 WDR77Q9BQA1 342 aaPredicted RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 SEMA4CQ9C0C4 833 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 SAP130Q9H0E3 1048 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 DNAJC27Q9NZQ0 273 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 ZNF229Q9UJW7 825 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 SSR3Q9UNL2 185 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 FARSAQ9Y285 508 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 EXOSC1Q9Y3B2 195 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 CNOT1A5YKK6 2376 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 C21orf140B9A014 251 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 STMND1H3BQB6 276 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 M0R129 80 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 M0R3H8 397 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 CYP7B1O75881 506 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 SOX14O95416 240 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 ADRA2AP08913 450 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 MYL12AP19105 171 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 DRD5P21918 477 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 DNASE1L3Q13609 305 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 GINS1Q14691 196 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 EBPQ15125 230 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 DECR1Q16698 335 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 CCNJQ5T5M9 372 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 TYW3Q6IPR3 259 aaKnown RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 FIGNL1Q6PIW4 674 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 NPSR1Q6W5P4 371 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 OLIG3Q7RTU3 272 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 TMPRSS7Q7RTY8 843 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 PHC2Q8IXK0 858 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 PEX5LQ8IYB4 626 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 ZNF619Q8N2I2 560 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 DIO2Q92813 273 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 RFKQ969G6 155 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 C8orf44Q96CB5 159 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 TMCO6Q96DC7 493 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 LCORQ96JN0 433 aaPredicted RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 ZNF582Q96NG8 517 aaPredicted RBP10.75□□□□□ -0.69
VRK3-223ENST00000601341 MESP1Q9BRJ9 268 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 G6PC3Q9BUM1 346 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 JAM3Q9BX67 310 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 ASPNQ9BXN1 380 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 GPR87Q9BY21 358 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 ARMC7Q9H6L4 198 aa10.75□□□□□ -0.69
VRK3-223ENST00000601341 NPAP1Q9NZP6 1156 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms