RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 C1orf159Q96HA4 380 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 SORCS2Q96PQ0 1159 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 THUMPD3Q9BV44 507 aaKnown RBP14.69□□□□□ -0.06
USE1-208ENST00000600970 GRPEL1Q9HAV7 217 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 MALT1Q9UDY8 824 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 FKBP7Q9Y680 259 aa14.69□□□□□ -0.06
USE1-208ENST00000600970 ARFGEF3Q5TH69 2177 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 KIAA0513O60268 411 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 DNAJA2O60884 412 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 TGFAP01135 160 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 CCT3P49368 545 aaKnown RBP14.68□□□□□ -0.06
USE1-208ENST00000600970 SESN3P58005 492 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 RPL38P63173 70 aaKnown RBP14.68□□□□□ -0.06
USE1-208ENST00000600970 CR1LQ2VPA4 569 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 SYT14P1Q58G82 188 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 RFLNBQ8N5W9 214 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 ACMSDQ8TDX5 336 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 ST8SIA1Q92185 356 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 FBXO17Q96EF6 278 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 FOXN4Q96NZ1 517 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 TRMOQ9BU70 441 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 SERINC1Q9NRX5 453 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 GPATCH2Q9NW75 528 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 DCDC2Q9UHG0 476 aa14.68□□□□□ -0.06
USE1-208ENST00000600970 PDLIM1O00151 329 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 TCF21O43680 179 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 MRPL33O75394 65 aaKnown RBP14.67□□□□□ -0.06
USE1-208ENST00000600970 ETF1P62495 437 aaKnown RBP14.67□□□□□ -0.06
USE1-208ENST00000600970 SLC25A3Q00325 362 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 CKAP4Q07065 602 aaKnown RBP14.67□□□□□ -0.06
USE1-208ENST00000600970 MERTKQ12866 999 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 TP53BP2Q13625 1128 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 CFAP157Q5JU67 520 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 PDZK1Q5T2W1 519 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 R3HCC1LQ7Z5L2 792 aaKnown RBP14.67□□□□□ -0.06
USE1-208ENST00000600970 OR7A2PQ8NGA2 310 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 OR52E4Q8NGH9 312 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 SOX7Q9BT81 388 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 PLA2G12AQ9BZM1 189 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 LAT2Q9GZY6 243 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 TUBB1Q9H4B7 451 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 SLC17A5Q9NRA2 495 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 ATP6V1HQ9UI12 483 aa14.67□□□□□ -0.06
USE1-208ENST00000600970 FAF1Q9UNN5 650 aaPredicted RBP14.67□□□□□ -0.06
USE1-208ENST00000600970 LOC390937A0A1W2PQ73 354 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 SERINC4A6NH21 518 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 ATP6V1G2-DDX39BF2Z307 99 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 GPR171O14626 319 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 LSM1O15116 133 aaKnown RBP14.66□□□□□ -0.06
USE1-208ENST00000600970 CYP7B1O75881 506 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 KRT16P08779 473 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 ABHD2P08910 425 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 NEFHP12036 1026 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 BCKDHAP12694 445 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 ZNF23P17027 643 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 ASMTP46597 345 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 DNAJB13P59910 316 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 SKP2Q13309 424 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 CARTPTQ16568 116 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 IQCCQ4KMZ1 466 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 C9orf135Q5VTT2 229 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 RNF165Q6ZSG1 346 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 MEX3DQ86XN8 651 aaKnown RBP14.66□□□□□ -0.06
USE1-208ENST00000600970 C17orf78Q8N4C9 275 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 OR56A1Q8NGH5 318 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 PSMA8Q8TAA3 256 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 PIGXQ8TBF5 258 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 MZB1Q8WU39 189 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 SLC25A43Q8WUT9 341 aaPredicted RBP14.66□□□□□ -0.06
USE1-208ENST00000600970 TMEM234Q8WY98 164 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 OR5P2Q8WZ92 322 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 ZHX1-C8orf76Q96EF9 292 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 DNAJA3Q96EY1 480 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 OR7D2Q96RA2 312 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 SDF2Q99470 211 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 ACER3Q9NUN7 267 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 KCNE5Q9UJ90 142 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 DCTN4Q9UJW0 460 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 MOKQ9UQ07 419 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 AMDHD2Q9Y303 409 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 TMED5Q9Y3A6 229 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 FIS1Q9Y3D6 152 aa14.66□□□□□ -0.06
USE1-208ENST00000600970 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.66□□□□□ -0.06
USE1-208ENST00000600970 AZIN1O14977 448 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 SCAMP2O15127 329 aaKnown RBP14.65□□□□□ -0.06
USE1-208ENST00000600970 GLRA3O75311 464 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 PMS2P2O95744 297 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 PROCP04070 461 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 LINC00032P0C843 101 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 TFPIP10646 304 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 LAMP1P11279 417 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 ITGA2P17301 1181 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 DDX5P17844 614 aaKnown RBP14.65□□□□□ -0.06
USE1-208ENST00000600970 PGCP20142 388 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 SLC16A1P53985 500 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 GALNTL6Q49A17 601 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 LIPMQ5VYY2 423 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 CCDC103Q8IW40 242 aa14.65□□□□□ -0.06
USE1-208ENST00000600970 C1orf162Q8NEQ5 155 aaPredicted RBP14.65□□□□□ -0.06
USE1-208ENST00000600970 OR5D16Q8NGK9 328 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms