RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 GPAT3Q53EU6 434 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 TMPPEQ6ZT21 453 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 ST8SIA1Q92185 356 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 L2HGDHQ9H9P8 463 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 CTPS2Q9NRF8 586 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 ACER3Q9NUN7 267 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 CISD1Q9NZ45 108 aaKnown RBP15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 WDR45Q9Y484 360 aa15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 V9GYY5 206 aaPredicted RBP15.56■□□□□ 0.08
SHKBP1-223ENST00000600552 ALPK2Q86TB3 2170 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 CIB4A0PJX0 185 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 CCT8L1PA6NM43 557 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 TMCC2O75069 709 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 NDUFS7O75251 213 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 BCAS1O75363 584 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 RAD51DO75771 328 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 DANCRP0C864 163 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 GGT1P19440 569 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 IGHV1-2P23083 117 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 CDH11P55287 796 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 OR2B6P58173 313 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 ABCE1P61221 599 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 CSNK2A1P68400 391 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 KRT71Q3SY84 523 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 SYT14P1Q58G82 188 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 PIAS4Q8N2W9 510 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 OR52N5Q8NH56 324 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 ROPN1LQ96C74 230 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 ZHX1-C8orf76Q96EF9 292 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 HS6ST2Q96MM7 605 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 C1QTNF6Q9BXI9 259 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 REG4Q9BYZ8 158 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 OR11A1Q9GZK7 315 aa15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 GDF2Q9UK05 429 aaPredicted RBP15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 NOSIPQ9Y314 301 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-223ENST00000600552 RTTNQ86VV8 2226 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 RNASET2O00584 256 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 ABCD4O14678 606 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 TYROBPO43914 113 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 TP53P04637 393 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 SERPINE1P05121 402 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 MYZAPP0CAP1 466 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 UQCRC2P22695 453 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 ETV4P43268 484 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF83P51522 516 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 HPCAP84074 193 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 PGGHGQ32M88 737 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 TYW3Q6IPR3 259 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 VPS37AQ8NEZ2 397 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF75CPQ92670 426 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 ZG16BQ96DA0 208 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 PAIP2Q9BPZ3 127 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 NUF2Q9BZD4 464 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF350Q9GZX5 532 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 SLCO5A1Q9H2Y9 848 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 KCNK9Q9NPC2 374 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 EMC3Q9P0I2 261 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 POU2F3Q9UKI9 436 aa15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 SPIN1Q9Y657 262 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-223ENST00000600552 PRSS51A0A1B0GVH4 220 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 CLDN24A6NM45 220 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 ZNF724A8MTY0 619 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 OVOL3O00110 214 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 RGS16O15492 202 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 ADAM11O75078 769 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 IGHV4-39P01824 125 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 C1QCP02747 245 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 PGM1P36871 562 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 SLC1A6P48664 564 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 KHKP50053 298 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 PHC1P78364 1004 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 DMTNQ08495 405 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 SPANXN4Q5MJ08 99 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 ANXA8L1Q5VT79 327 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 C9orf135Q5VTT2 229 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 MTDHQ86UE4 582 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 CCDC103Q8IW40 242 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 ARFGAP2Q8N6H7 521 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 AENQ8WTP8 325 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 APH1AQ96BI3 265 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 USB1Q9BQ65 265 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 SLC35A5Q9BS91 424 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 TRIM2Q9C040 744 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 YAE1D1Q9NRH1 226 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 ASIC5Q9NY37 505 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 NPAP1Q9NZP6 1156 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 MARCOQ9UEW3 520 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 ADAM21Q9UKJ8 722 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 SLC35A3Q9Y2D2 325 aa15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 SONP18583 2426 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-223ENST00000600552 SSX4O60224 188 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 KIAA0513O60268 411 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 AGR2O95994 175 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 BGNP21810 368 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 S100A3P33764 101 aa15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 APOBEC1P41238 236 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 IDH2P48735 452 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-223ENST00000600552 RPL14P50914 215 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms