RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 MND1Q9BWT6 205 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 WWTR1Q9GZV5 400 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 HOXD1Q9GZZ0 328 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 FGF20Q9NP95 211 aaPredicted RBP15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 RARRES3Q9UL19 164 aa15.62■□□□□ 0.09
SHKBP1-216ENST00000598201 LOC100506127A0A0U1RQW1 187 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 SOCS6O14544 535 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 FLRT2O43155 660 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 RCBTB2O95199 551 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 NADKO95544 446 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 SCG5P05408 212 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 HPGDP15428 266 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 BMP7P18075 431 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 ADH7P40394 386 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 GRK6P43250 576 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 MOGQ16653 247 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 SLITRK4Q8IW52 837 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 LNX2Q8N448 690 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF527Q8NB42 609 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 C3orf49Q96BT1 292 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 ART5Q96L15 291 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 CHCHD6Q9BRQ6 235 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 CENPOQ9BU64 300 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 OCIAD1Q9NX40 245 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 PTPRZ1P23471 2315 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 COL5A1P20908 1838 aaPredicted RBP15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 A0A087WUJ7 227 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 SNTNA6NMZ2 147 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 CCRL2O00421 344 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 SCDO00767 359 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 REM1O75628 298 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 UBL4AP11441 157 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 GPR143P51810 404 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 C3orf38Q5JPI3 329 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 OAFQ86UD1 273 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 IFT27Q9BW83 186 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 HCAR1Q9BXC0 346 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 DCSTAMPQ9H295 470 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 MED20Q9H944 212 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 MCCC2Q9HCC0 563 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 COPS7AQ9UBW8 275 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 OSGIN1Q9UJX0 560 aa15.61■□□□□ 0.09
SHKBP1-216ENST00000598201 C17orf51A8MQB3 221 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 LRRN3E7EW58 273 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 MYL12BO14950 172 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 HCN1O60741 890 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 RPS3AP61247 264 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 COPZ1P61923 177 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 DCAF7P61962 342 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 DAB2P98082 770 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 PHF19Q5T6S3 580 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 C1QTNF12Q5T7M4 302 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 OR2G6Q5TZ20 316 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 NXNL2Q5VZ03 156 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 HLA-DQA1Q5Y7H0 255 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF385CQ66K41 422 aaPredicted RBP15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 FCRLBQ6BAA4 426 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 LCN10Q6JVE6 187 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 PLBD1Q6P4A8 553 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 B3GLCTQ6Y288 498 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 CXXC5Q7LFL8 322 aaKnown RBP15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF440Q8IYI8 595 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 OR4F15Q8NGB8 312 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 RHBDD1Q8TEB9 315 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 OTULINQ96BN8 352 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 PLGRKTQ9HBL7 147 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 GVINP1Q7Z2Y8 2422 aa15.6■□□□□ 0.09
SHKBP1-216ENST00000598201 IDSB3KWA1 339 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 TO15178 435 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 TSPAN2O60636 221 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 MST1P26927 711 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 OPRL1P41146 370 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 CCR4P51679 360 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 FOXK2Q01167 660 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 DGUOKQ16854 277 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF362Q5T0B9 420 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 RPL13AP3Q6NVV1 102 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 LRRC17Q8N6Y2 441 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF441Q8N8Z8 693 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 C7orf57Q8NEG2 295 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 DNAJA4Q8WW22 397 aaPredicted RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 RFKQ969G6 155 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 SLIRPQ9GZT3 109 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 MRTO4Q9UKD2 239 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 ICAM5Q9UMF0 924 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 ZC3H12DA2A288 527 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 GTPBP1O00178 669 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 WWP2O00308 870 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 ZNF264O43296 627 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 PPP1R3DO95685 299 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 LIMS3P0CW19 117 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 LIMS4P0CW20 117 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 HTR1FP30939 366 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 CD79BP40259 229 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 DCDP81605 110 aaKnown RBP15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 SLC29A4Q7RTT9 530 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 ANKRD37Q7Z713 158 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 NAXDQ8IW45 347 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 SLC15A4Q8N697 577 aa15.59■□□□□ 0.09
SHKBP1-216ENST00000598201 TMCO5AQ8N6Q1 288 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms