RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 SMAD9O15198 467 aaKnown RBP13.4□□□□□ -0.26
LIG1-215ENST00000597901 CYTIPO60759 359 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 DIAPH2O60879 1101 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 ADAM11O75078 769 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 ZCCHC18P0CG32 403 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 TFPIP10646 304 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 PSMB1P20618 241 aaKnown RBP13.4□□□□□ -0.26
LIG1-215ENST00000597901 MAGEA8P43361 318 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 IDH2P48735 452 aaKnown RBP13.4□□□□□ -0.26
LIG1-215ENST00000597901 DIO1P49895 249 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 POLR2JP52435 117 aaKnown RBP13.4□□□□□ -0.26
LIG1-215ENST00000597901 MVDP53602 400 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 PLAURQ03405 335 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 RASGEF1BQ0VAM2 473 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 MAPK11Q15759 364 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 ACKR1Q16570 336 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 TFAP2EQ6VUC0 442 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 GRINAQ7Z429 371 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 CXorf67Q86X51 503 aaPredicted RBP13.4□□□□□ -0.26
LIG1-215ENST00000597901 CMIPQ8IY22 773 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 GABRG1Q8N1C3 465 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 ITCHQ96J02 903 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 PSD2Q9BQI7 771 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 TACO1Q9BSH4 297 aaKnown RBP13.4□□□□□ -0.26
LIG1-215ENST00000597901 ACTR6Q9GZN1 396 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 RMND5AQ9H871 391 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 BCO1Q9HAY6 547 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 BEX4Q9NWD9 120 aaPredicted RBP13.4□□□□□ -0.26
LIG1-215ENST00000597901 KLHL9Q9P2J3 617 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 AKAP6Q13023 2319 aa13.4□□□□□ -0.26
LIG1-215ENST00000597901 ZNF814B7Z6K7 855 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 AP3D1O14617 1153 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 GCM2O75603 506 aaPredicted RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 TGDSO95455 350 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 ANP32DO95626 131 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 ADAP00813 363 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 DBIP07108 87 aaKnown RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 TFPTP0C1Z6 253 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 IL7RP16871 459 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 FKBP2P26885 142 aaKnown RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 HOXC12P31275 282 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 CLK1P49759 484 aaKnown RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 CSNK2A1P68400 391 aaPredicted RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 FOXD4Q12950 439 aaPredicted RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 GNA13Q14344 377 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 SYT14P1Q58G82 188 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 BEX5Q5H9J7 111 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 SFRP5Q5T4F7 317 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 MTDHQ86UE4 582 aaKnown RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 MIER2Q8N344 545 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 STEAP2Q8NFT2 490 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 OR9I1Q8NGQ6 314 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 SLC25A43Q8WUT9 341 aaPredicted RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 VPS33AQ96AX1 596 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 ATP6V1G3Q96LB4 118 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 C7orf26Q96N11 449 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 TPT1P8Q9HAU6 139 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 CHRNA9Q9UGM1 479 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 SPIN1Q9Y657 262 aaPredicted RBP13.39□□□□□ -0.27
LIG1-215ENST00000597901 ABCA4P78363 2273 aa13.39□□□□□ -0.27
LIG1-215ENST00000597901 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.38□□□□□ -0.27
LIG1-215ENST00000597901 FAM234BA2RU67 622 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 ZNF724A8MTY0 619 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 ETFAP13804 333 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 CCNA2P20248 432 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 FPR1P21462 350 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 RPS4Y1P22090 263 aaKnown RBP13.38□□□□□ -0.27
LIG1-215ENST00000597901 CRATP43155 626 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 HTR3AP46098 478 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 IDH3AP50213 366 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 P2RY6Q15077 328 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 TSC22D1Q15714 1073 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 GTDC1Q4AE62 458 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 DNAJC14Q6Y2X3 702 aaPredicted RBP13.38□□□□□ -0.27
LIG1-215ENST00000597901 MSANTD1Q6ZTZ1 278 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 WFDC8Q8IUA0 241 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 LRRC8CQ8TDW0 803 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 WDR60Q8WVS4 1066 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 PIGTQ969N2 578 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 S100PBPQ96BU1 408 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 ARL5BQ96KC2 179 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 PIP5K1AQ99755 562 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 UBTD1Q9HAC8 227 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 SLCO1B3Q9NPD5 702 aa13.38□□□□□ -0.27
LIG1-215ENST00000597901 TMED7-TICAM2A0A0A6YYA0 188 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 CFAP73A6NFT4 308 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 FESP07332 822 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 OR3A2P47893 321 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 DSTNP60981 165 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 NKX6-1P78426 367 aaPredicted RBP13.37□□□□□ -0.27
LIG1-215ENST00000597901 ITGADQ13349 1161 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 PDK3Q15120 406 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 TTMPQ5BVD1 217 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 C6orf10Q5SRN2 563 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 ALKBH2Q6NS38 261 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 GALNT5Q7Z7M9 940 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 VRK2Q86Y07 508 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 PEX5LQ8IYB4 626 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 WFDC11Q8NEX6 87 aa13.37□□□□□ -0.27
LIG1-215ENST00000597901 OR52P1PQ8NH57 321 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms