RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 CLDN15P56746 228 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 PSME3P61289 254 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 LIPEQ05469 1076 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 DMTNQ08495 405 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 VEZF1Q14119 521 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 PPP4R4Q6NUP7 873 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 C3orf33Q6P1S2 294 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 C8orf82Q6P1X6 216 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 SEM1Q6ZVN7 128 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 CCDC71Q8IV32 467 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 MICU2Q8IYU8 434 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 CADM2Q8N3J6 435 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 FITM2Q8N6M3 262 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 SMYD1Q8NB12 490 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 OR2V1Q8NHB1 315 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 SLC35B4Q969S0 331 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 CTPS2Q9NRF8 586 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 CLCF1Q9UBD9 225 aa17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 SPIN1Q9Y657 262 aaPredicted RBP17.69■□□□□ 0.42
SHKBP1-214ENST00000597396 A0A0G2JNJ9 132 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 A0A0J9YW62 118 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 ELOVL7A1L3X0 281 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 A1L4Q6 167 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 MBD3L4A6NDZ8 208 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 MBD3L3A6NE82 208 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 MBD3L5A6NJ08 208 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 NME4O00746 187 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 GCM2O75603 506 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 PRG2P13727 222 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 AGAP20933 346 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 SHC1P29353 583 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 SLC7A1P30825 629 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 TIMP3P35625 211 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 DLX5P56178 289 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 MXRA7P84157 204 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 KRT72Q14CN4 511 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 TMEM176BQ3YBM2 270 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 GLIPR1L2Q4G1C9 344 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 HBMQ6B0K9 141 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 PLXDC2Q6UX71 529 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 ADGRE4PQ86SQ3 457 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 TNIP2Q8NFZ5 429 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 OR10D3Q8NH80 312 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 MBD3L2Q8NHZ7 208 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 WNT2BQ93097 391 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 ZNF845Q96IR2 970 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 UCN2Q96RP3 112 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 TM9SF2Q99805 663 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 PAQR5Q9NXK6 330 aaPredicted RBP17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 Q9UFV3 132 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 PRDM4Q9UKN5 801 aa17.68■□□□□ 0.42
SHKBP1-214ENST00000597396 SLC22A20A6NK97 555 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 HSPB2A8KAH6 182 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 CXCL13O43927 109 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 TACR3P29371 465 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 CHRNB4P30926 498 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 SLC1A3P43003 542 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 POLR2HP52434 150 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 RGS8P57771 180 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 NCALDP61601 193 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 HSPB2Q16082 182 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 CTU2Q2VPK5 515 aaKnown RBP17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 WBP2NLQ6ICG8 309 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 CCDC80Q76M96 950 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 C9orf106Q8NAJ2 232 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 CA5BP1Q8WTZ4 195 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 SLC25A43Q8WUT9 341 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 RASSF5Q8WWW0 418 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 TAMM41Q96BW9 452 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 ADGRG7Q96K78 797 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 RSPO3Q9BXY4 272 aaPredicted RBP17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 PRRG4Q9BZD6 226 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 EVA1AQ9H8M9 152 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 SPAG4Q9NPE6 437 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 CHRNA9Q9UGM1 479 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 ZNF175Q9Y473 711 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 NOTCH2Q04721 2471 aa17.67■□□□□ 0.42
SHKBP1-214ENST00000597396 NBPF19A0A087WUL8 3843 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 TMED7-TICAM2A0A0A6YYA0 188 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 ADAMDEC1O15204 470 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 GSTA4O15217 222 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 TOXO94900 526 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 SYNGR4O95473 234 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 CLDN14O95500 239 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 TFPIP10646 304 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 CCNA2P20248 432 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 CEACAM8P31997 349 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 GSK3BP49841 420 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 MNAT1P51948 309 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 HOXC5Q00444 222 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 PON3Q15166 354 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 COMTD1Q86VU5 262 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 FIG4Q92562 907 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 NSL1Q96IY1 281 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 OR5B2Q96R09 309 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 ALG2Q9H553 416 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 TIGARQ9NQ88 270 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 NDE1Q9NXR1 346 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 ADA2Q9NZK5 511 aa17.66■□□□□ 0.42
SHKBP1-214ENST00000597396 GMPR2Q9P2T1 348 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms