RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 DMRTC2Q8IXT2 367 aaPredicted RBP9.98□□□□□ -0.81
VRK3-210ENST00000596121 ZZZ3Q8IYH5 903 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 POU5F2Q8N7G0 328 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 BBS10Q8TAM1 723 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 LRRC58Q96CX6 371 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 DNAJA3Q96EY1 480 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 SFXN3Q9BWM7 321 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 PRR14Q9BWN1 585 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 SPATA9Q9BWV2 254 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 OR11A1Q9GZK7 315 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 GMPR2Q9P2T1 348 aaKnown RBP9.98□□□□□ -0.81
VRK3-210ENST00000596121 CLEC4AQ9UMR7 237 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 APCP25054 2843 aa9.98□□□□□ -0.81
VRK3-210ENST00000596121 IGHV3-15A0A0B4J1V0 119 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 CFAP73A6NFT4 308 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 EVPLLA8MZ36 301 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 FAAHO00519 579 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 MRASO14807 208 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 HNRNPRO43390 633 aaKnown RBP9.97□□□□□ -0.81
VRK3-210ENST00000596121 SNX3O60493 162 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 THBS1P07996 1170 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 COX6B1P14854 86 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ETS2P15036 469 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 CCNA2P20248 432 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 TACR3P29371 465 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 AQP1P29972 269 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 CRYBA2P53672 197 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 PCBP3P57721 371 aaKnown RBP9.97□□□□□ -0.81
VRK3-210ENST00000596121 SIRPAP78324 504 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 DMTNQ08495 405 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 SELENBP1Q13228 472 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ZNF239Q16600 458 aaKnown RBP9.97□□□□□ -0.81
VRK3-210ENST00000596121 TRMT5Q32P41 509 aaKnown RBP9.97□□□□□ -0.81
VRK3-210ENST00000596121 COQ5Q5HYK3 327 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ZNF311Q5JNZ3 666 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 REEP3Q6NUK4 255 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 GRINAQ7Z429 371 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 MTDHQ86UE4 582 aaKnown RBP9.97□□□□□ -0.81
VRK3-210ENST00000596121 CALHM3Q86XJ0 350 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 MCEMP1Q8IX19 187 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 CNEP1R1Q8N9A8 125 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 OR10A6Q8NH74 314 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ZNF563Q8TA94 476 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 RCN3Q96D15 328 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ARL5BQ96KC2 179 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ZFP3Q96NJ6 502 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ADAM19Q9H013 955 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 FAM107BQ9H098 131 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 MYLK2Q9H1R3 596 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 OPN3Q9H1Y3 402 aaPredicted RBP9.97□□□□□ -0.81
VRK3-210ENST00000596121 PIF1Q9H611 641 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 FAM53CQ9NYF3 392 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 OSGIN1Q9UJX0 560 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ING1Q9UK53 422 aaPredicted RBP9.97□□□□□ -0.81
VRK3-210ENST00000596121 CAPN7Q9Y6W3 813 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 TEX15Q9BXT5 2789 aa9.97□□□□□ -0.81
VRK3-210ENST00000596121 ANKHD1Q8IWZ3 2542 aaKnown RBP9.96□□□□□ -0.81
VRK3-210ENST00000596121 CSMD1Q96PZ7 3565 aa9.96□□□□□ -0.81
VRK3-210ENST00000596121 TMED7-TICAM2A0A0A6YYA0 188 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 TMEM72A0PK05 275 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 ZC3H12DA2A288 527 aaKnown RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 GMNCA6NCL1 334 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 TMEM247A6NEH6 219 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 A8MXE2 369 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 EEF1E1-BLOC1S5C9J1V9 151 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 C5orf58C9J3I9 102 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 EEF1E1O43324 174 aaKnown RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 TPST2O60704 377 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 MFN2O95140 757 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 CRHP06850 196 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 ME2P23368 584 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 SLC6A2P23975 617 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 HTR2AP28223 471 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 ADSLP30566 484 aaPredicted RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 UQCRC1P31930 480 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 APOBEC1P41238 236 aaKnown RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 SLC1A3P43003 542 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 ASCL1P50553 236 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 KRTAP10-9P60411 292 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 GNGT1P63211 74 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 CYLC2Q14093 348 aaPredicted RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 GNA13Q14344 377 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 LARS2Q15031 903 aaKnown RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 PPP4R4Q6NUP7 873 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 DHRS4L2Q6PKH6 230 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 ZNF474Q6S9Z5 364 aaPredicted RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 LUZP2Q86TE4 346 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 HIPK4Q8NE63 616 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 ABHD3Q8WU67 409 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 TMEM234Q8WY98 164 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 RNASE6Q93091 150 aaKnown RBP9.96□□□□□ -0.82
VRK3-210ENST00000596121 ZNF583Q96ND8 569 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 OR5B2Q96R09 309 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 STOML1Q9UBI4 398 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 PACSIN3Q9UKS6 424 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 ZNF232Q9UNY5 417 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 CORO2BQ9UQ03 480 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 IFT52Q9Y366 437 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 TMED7Q9Y3B3 224 aa9.96□□□□□ -0.82
VRK3-210ENST00000596121 POLQO75417 2590 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms