RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 VHLP40337 213 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 CLDN15P56746 228 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 CLDN20P56880 219 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 RAC1P63000 192 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 HOXC5Q00444 222 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 KCNC4Q03721 635 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 MERTKQ12866 999 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 CEACAM7Q14002 265 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 C4orf17Q53FE4 359 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 PLEKHM3Q6ZWE6 761 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 GRINAQ7Z429 371 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 UBQLNLQ8IYU4 475 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 RASSF5Q8WWW0 418 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 SMPDL3BQ92485 455 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 FIG4Q92562 907 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 CD300AQ9UGN4 299 aa17.42■□□□□ 0.38
PNKP-207ENST00000596014 ARHGAP21Q5T5U3 1957 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 SYT5O00445 386 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 HSD17B1P14061 328 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 GABRA1P14867 456 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 ELK4P28324 431 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 HTR1EP28566 365 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 SLC1A3P43003 542 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 SUCLG1P53597 346 aaKnown RBP17.41■□□□□ 0.38
PNKP-207ENST00000596014 COPZ1P61923 177 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 LRRC23Q53EV4 343 aaPredicted RBP17.41■□□□□ 0.38
PNKP-207ENST00000596014 FJX1Q86VR8 437 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 LILRA2Q8N149 483 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 FAM156AQ8NDB6 213 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 WFDC6Q9BQY6 131 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 TMEM185BQ9H7F4 350 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 SLC5A6Q9Y289 635 aa17.41■□□□□ 0.38
PNKP-207ENST00000596014 LRRK2Q5S007 2527 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 E9PLN8 166 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 H0YC42 278 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 SEMA7AO75326 666 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 OPN1LWP04000 364 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 FESP07332 822 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 HOXD4P09016 255 aaPredicted RBP17.4■□□□□ 0.38
PNKP-207ENST00000596014 TCN1P20061 433 aaPredicted RBP17.4■□□□□ 0.38
PNKP-207ENST00000596014 ME2P23368 584 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 PTGER4P35408 488 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 APOBEC1P41238 236 aaKnown RBP17.4■□□□□ 0.38
PNKP-207ENST00000596014 ZNF136P52737 540 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 TPD52P55327 224 aaPredicted RBP17.4■□□□□ 0.38
PNKP-207ENST00000596014 CYBRD1Q53TN4 286 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 RTL6Q6ICC9 239 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 GGNQ86UU5 652 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 MEIOBQ8N635 442 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 NRG4Q8WWG1 115 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 VKORC1Q9BQB6 163 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 EVA1AQ9H8M9 152 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 EGFL7Q9UHF1 273 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 ERRFI1Q9UJM3 462 aaPredicted RBP17.4■□□□□ 0.38
PNKP-207ENST00000596014 MEMO1Q9Y316 297 aa17.4■□□□□ 0.38
PNKP-207ENST00000596014 TMEM229AB2RXF0 380 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 SEC14L5O43304 696 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 NCK1P16333 377 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 GGT1P19440 569 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 HTR3AP46098 478 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 RGS8P57771 180 aaPredicted RBP17.39■□□□□ 0.37
PNKP-207ENST00000596014 SPATS1Q496A3 300 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 WBP2NLQ6ICG8 309 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 POMZP3Q6PJE2 187 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 CADM2Q8N3J6 435 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 RPRMLQ8N4K4 120 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 ZPLD1Q8TCW7 415 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 PYDC1Q8WXC3 89 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 ARHGDIGQ99819 225 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 TUBA1CQ9BQE3 449 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 PRR14Q9BWN1 585 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 ADAM19Q9H013 955 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 CTPS2Q9NRF8 586 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 BAG5Q9UL15 447 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 FAM215AQ9Y5M1 114 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 KIAA1549Q9HCM3 1950 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 TACR3P29371 465 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 MSX2P35548 267 aaPredicted RBP17.39■□□□□ 0.37
PNKP-207ENST00000596014 SELENOWP63302 87 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 SRSF1Q07955 248 aaKnown RBP eCLIP17.39■□□□□ 0.37
PNKP-207ENST00000596014 SELENBP1Q13228 472 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 FLOT2Q14254 428 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 SF3B4Q15427 424 aaKnown RBP eCLIP17.39■□□□□ 0.374e-8■■■■□ 20.8
PNKP-207ENST00000596014 FXNQ16595 210 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 NRF1Q16656 503 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 ACSF3Q4G176 576 aaPredicted RBP17.39■□□□□ 0.37
PNKP-207ENST00000596014 C1orf185Q5T7R7 199 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 GLYATQ6IB77 296 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 ADGRG3Q86Y34 549 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 EID3Q8N140 333 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 ATP6V1C2Q8NEY4 427 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 DMRTA2Q96SC8 542 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 SERINC1Q9NRX5 453 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 OSGIN1Q9UJX0 560 aa17.39■□□□□ 0.37
PNKP-207ENST00000596014 MPDZO75970 2070 aa17.38■□□□□ 0.37
PNKP-207ENST00000596014 M0R3H8 397 aa17.38■□□□□ 0.37
PNKP-207ENST00000596014 EIF1AYO14602 144 aaKnown RBP17.38■□□□□ 0.37
PNKP-207ENST00000596014 ADAMDEC1O15204 470 aa17.38■□□□□ 0.37
PNKP-207ENST00000596014 TPST2O60704 377 aa17.38■□□□□ 0.37
PNKP-207ENST00000596014 SHC1P29353 583 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms