RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 TMPPEQ6ZT21 453 aa20.87■□□□□ 0.93
LSM4-204ENST00000594828 ARFGAP2Q8N6H7 521 aa20.87■□□□□ 0.93
LSM4-204ENST00000594828 ANKFN1Q8N957 763 aa20.87■□□□□ 0.93
LSM4-204ENST00000594828 SLC25A43Q8WUT9 341 aaPredicted RBP20.87■□□□□ 0.93
LSM4-204ENST00000594828 MAELQ96JY0 434 aaKnown RBP20.87■□□□□ 0.93
LSM4-204ENST00000594828 PSD2Q9BQI7 771 aa20.87■□□□□ 0.93
LSM4-204ENST00000594828 EXOSC3Q9NQT5 275 aaKnown RBP20.87■□□□□ 0.93
LSM4-204ENST00000594828 DLL4Q9NR61 685 aa20.87■□□□□ 0.93
LSM4-204ENST00000594828 ING1Q9UK53 422 aaPredicted RBP20.87■□□□□ 0.93
LSM4-204ENST00000594828 SPIN1Q9Y657 262 aaPredicted RBP20.87■□□□□ 0.93
LSM4-204ENST00000594828 CLDN24A6NM45 220 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 SULT2B1O00204 365 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 RFXANKO14593 260 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 SMAD9O15198 467 aaKnown RBP20.86■□□□□ 0.93
LSM4-204ENST00000594828 ARHGEF9O43307 516 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 CYTIPO60759 359 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 KRT75O95678 551 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 TFPIP10646 304 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 NR1H2P55055 460 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 CSNK2A1P68400 391 aaPredicted RBP20.86■□□□□ 0.93
LSM4-204ENST00000594828 SLC9B1Q4ZJI4 515 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 SFRP5Q5T4F7 317 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 LRRC74BQ6ZQY2 392 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 GRINAQ7Z429 371 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 PIWIL2Q8TC59 973 aaKnown RBP20.86■□□□□ 0.93
LSM4-204ENST00000594828 PNPT1Q8TCS8 783 aaKnown RBP20.86■□□□□ 0.93
LSM4-204ENST00000594828 S100PBPQ96BU1 408 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 PLPPR2Q96GM1 343 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 CCL19Q99731 98 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 CCDC106Q9BWC9 280 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 SLC38A1Q9H2H9 487 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 MTHFD2LQ9H903 347 aaPredicted RBP20.86■□□□□ 0.93
LSM4-204ENST00000594828 CTPS2Q9NRF8 586 aa20.86■□□□□ 0.93
LSM4-204ENST00000594828 ADAP00813 363 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 CHRM4P08173 479 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 NR2F1P10589 423 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 IL32P24001 234 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 P2RY6Q15077 328 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 TSC22D1Q15714 1073 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 GSTA3Q16772 222 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 COX20Q5RI15 118 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 ALKBH2Q6NS38 261 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 P3H2Q8IVL5 708 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 LRRC75A-AS1Q8N1F1 130 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 CNOT9Q92600 299 aaKnown RBP20.85■□□□□ 0.93
LSM4-204ENST00000594828 ZNF775Q96BV0 537 aaPredicted RBP20.85■□□□□ 0.93
LSM4-204ENST00000594828 CHRNA9Q9UGM1 479 aa20.85■□□□□ 0.93
LSM4-204ENST00000594828 ZNF469Q96JG9 3925 aaPredicted RBP20.84■□□□□ 0.93
LSM4-204ENST00000594828 AGAP5A6NIR3 686 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 ZNF814B7Z6K7 855 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 KLF11O14901 512 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 FESP07332 822 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 FKBP2P26885 142 aaKnown RBP20.84■□□□□ 0.93
LSM4-204ENST00000594828 OR3A2P47893 321 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 IDH2P48735 452 aaKnown RBP20.84■□□□□ 0.93
LSM4-204ENST00000594828 ZNF704Q6ZNC4 412 aaPredicted RBP20.84■□□□□ 0.93
LSM4-204ENST00000594828 MAVSQ7Z434 540 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 KRTAP1-3Q8IUG1 177 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 CMIPQ8IY22 773 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 ZNF75CPQ92670 426 aaPredicted RBP20.84■□□□□ 0.93
LSM4-204ENST00000594828 ZIM2Q9NZV7 527 aa20.84■□□□□ 0.93
LSM4-204ENST00000594828 ZNF724A8MTY0 619 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 UBDO15205 165 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 IL7RP16871 459 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 HTR3AP46098 478 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 PLAURQ03405 335 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 ITGADQ13349 1161 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 GNA13Q14344 377 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 MTDHQ86UE4 582 aaKnown RBP20.83■□□□□ 0.93
LSM4-204ENST00000594828 ADGRG3Q86Y34 549 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 PMM1Q92871 262 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 KISS1RQ969F8 398 aaPredicted RBP20.83■□□□□ 0.93
LSM4-204ENST00000594828 OR52B2Q96RD2 323 aa20.83■□□□□ 0.93
LSM4-204ENST00000594828 ZNF300Q96RE9 604 aaPredicted RBP20.83■□□□□ 0.93
LSM4-204ENST00000594828 GSX1Q9H4S2 264 aaPredicted RBP20.83■□□□□ 0.93
LSM4-204ENST00000594828 SDR39U1Q9NRG7 319 aaPredicted RBP20.83■□□□□ 0.93
LSM4-204ENST00000594828 MAP1AP78559 2803 aaPredicted RBP20.82■□□□□ 0.92
LSM4-204ENST00000594828 ADAM11O75078 769 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 ANP32DO95626 131 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 PLAUP00749 431 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 MAGEA8P43361 318 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 CLK1P49759 484 aaKnown RBP20.82■□□□□ 0.92
LSM4-204ENST00000594828 DNAJC14Q6Y2X3 702 aaPredicted RBP20.82■□□□□ 0.92
LSM4-204ENST00000594828 Q6ZT83 130 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 GALNT5Q7Z7M9 940 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 WDR60Q8WVS4 1066 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 HSD17B8Q92506 261 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 ZHX1-C8orf76Q96EF9 292 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 ARL5BQ96KC2 179 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 USB1Q9BQ65 265 aaKnown RBP20.82■□□□□ 0.92
LSM4-204ENST00000594828 RMND5AQ9H871 391 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 SLC6A13Q9NSD5 602 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 PRSS50Q9UI38 385 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 HDGFL3Q9Y3E1 203 aa20.82■□□□□ 0.92
LSM4-204ENST00000594828 AP3D1O14617 1153 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 PMS2P2O95744 297 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 DBIP07108 87 aaKnown RBP20.81■□□□□ 0.92
LSM4-204ENST00000594828 ZCCHC18P0CG32 403 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 CCNA2P20248 432 aa20.81■□□□□ 0.92
LSM4-204ENST00000594828 RPS4Y1P22090 263 aaKnown RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms