RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 C8BP07358 591 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 UBTFL6P0CB48 400 aaPredicted RBP11.75□□□□□ -0.53
H3F3B-213ENST00000593254 PPP3CBP16298 524 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 LOXP28300 417 aaPredicted RBP11.75□□□□□ -0.53
H3F3B-213ENST00000593254 SLC7A1P30825 629 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 CHI3L1P36222 383 aaPredicted RBP11.75□□□□□ -0.53
H3F3B-213ENST00000593254 PGM1P36871 562 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 NME5P56597 212 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 RAC3P60763 192 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 MAGOHP61326 146 aaKnown RBP11.75□□□□□ -0.53
H3F3B-213ENST00000593254 TIGD2Q4W5G0 525 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 ATG16L1Q676U5 607 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 ANKRD34AQ69YU3 496 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 C3orf33Q6P1S2 294 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 FCRLAQ7L513 359 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 STK32CQ86UX6 486 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 ZNF619Q8N2I2 560 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 ROPN1LQ96C74 230 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 PIK3IP1Q96FE7 263 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 ZC3HAV1LQ96H79 300 aaKnown RBP11.75□□□□□ -0.53
H3F3B-213ENST00000593254 MAELQ96JY0 434 aaKnown RBP11.75□□□□□ -0.53
H3F3B-213ENST00000593254 TMBIM4Q9HC24 238 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 FANCFQ9NPI8 374 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 KLHL13Q9P2N7 655 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 SLC35A3Q9Y2D2 325 aa11.75□□□□□ -0.53
H3F3B-213ENST00000593254 A0A1W2PNR3 127 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 CCDC154A6NI56 674 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 RNF212BA8MTL3 300 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 BCAS1O75363 584 aaPredicted RBP11.74□□□□□ -0.53
H3F3B-213ENST00000593254 CYP7B1O75881 506 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 H6PDO95479 791 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 KITP10721 976 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 PGCP20142 388 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 PSMB1P20618 241 aaKnown RBP11.74□□□□□ -0.53
H3F3B-213ENST00000593254 SESN3P58005 492 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 TXNL4AP83876 142 aaKnown RBP11.74□□□□□ -0.53
H3F3B-213ENST00000593254 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 LRRC74AQ0VAA2 488 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 RNF130Q86XS8 419 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 TUSC5Q8IXB3 177 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 SLC43A2Q8N370 569 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 TRIML2Q8N7C3 387 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 GLB1L3Q8NCI6 653 aaPredicted RBP11.74□□□□□ -0.53
H3F3B-213ENST00000593254 ATP6V1C2Q8NEY4 427 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 TMEM234Q8WY98 164 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 ARL8AQ96BM9 186 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 ZG16BQ96DA0 208 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 PERPQ96FX8 193 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 OR52E6Q96RD3 313 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 PANX1Q96RD7 426 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 INPP5KQ9BT40 448 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 QRSL1Q9H0R6 528 aaKnown RBP11.74□□□□□ -0.53
H3F3B-213ENST00000593254 OR10A4Q9H209 315 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 C12orf49Q9H741 205 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 MANSC1Q9H8J5 431 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 NKIRAS1Q9NYS0 192 aa11.74□□□□□ -0.53
H3F3B-213ENST00000593254 KLF11O14901 512 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 GCM2O75603 506 aaPredicted RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 PRKD3O94806 890 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 CNOT4O95628 575 aaKnown RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 YES1P07947 543 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 IDO1P14902 403 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 ENPP1P22413 925 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 CDKN2CP42773 168 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 KCNJ10P78508 379 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 HPCAP84074 193 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 PLAURQ03405 335 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 CHRNEQ04844 493 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 MERTKQ12866 999 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 ACKR1Q16570 336 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 SLC9B1Q4ZJI4 515 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 PDCD4Q53EL6 469 aaKnown RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 GPAT3Q53EU6 434 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 TMEM201Q5SNT2 666 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 TFAP2EQ6VUC0 442 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 PLEKHM3Q6ZWE6 761 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 NUFIP2Q7Z417 695 aaKnown RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 MAVSQ7Z434 540 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 GABRG1Q8N1C3 465 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 TRNT1Q96Q11 434 aaKnown RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 ZBTB18Q99592 522 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 CCL19Q99731 98 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 PSD2Q9BQI7 771 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 TACO1Q9BSH4 297 aaKnown RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 GSX2Q9BZM3 304 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 ACTR6Q9GZN1 396 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 SLC38A1Q9H2H9 487 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 BCO1Q9HAY6 547 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 EXOSC3Q9NQT5 275 aaKnown RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 ACER3Q9NUN7 267 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 ING1Q9UK53 422 aaPredicted RBP11.73□□□□□ -0.53
H3F3B-213ENST00000593254 LIPT1Q9Y234 373 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 GPR52Q9Y2T5 361 aa11.73□□□□□ -0.53
H3F3B-213ENST00000593254 IGHV3-15A0A0B4J1V0 119 aa11.72□□□□□ -0.53
H3F3B-213ENST00000593254 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
H3F3B-213ENST00000593254 SMAD9O15198 467 aaKnown RBP11.72□□□□□ -0.53
H3F3B-213ENST00000593254 KLF4O43474 513 aa11.72□□□□□ -0.53
H3F3B-213ENST00000593254 ADAM11O75078 769 aa11.72□□□□□ -0.53
H3F3B-213ENST00000593254 IL6P05231 212 aa11.72□□□□□ -0.53
H3F3B-213ENST00000593254 FPR1P21462 350 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms