RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CAPN3P20807 821 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 UQCRC1P31930 480 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 KIR2DL2P43627 348 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 ANXA11P50995 505 aaKnown RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 KRTAP10-9P60411 292 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 STX1BP61266 288 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EEF1A1P68104 462 aaKnown RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 IRX1P78414 480 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 HPCAP84074 193 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 TLE4Q04727 773 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 CBFBQ13951 182 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 QPRTQ15274 297 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 GPAT3Q53EU6 434 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 LRIF1Q5T3J3 769 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EEF1A1P5Q5VTE0 462 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 OR2A2Q6IF42 318 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 SLC2A7Q6PXP3 512 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 LRRC74BQ6ZQY2 392 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 ESPNLQ6ZVH7 1005 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EIF3MQ7L2H7 374 aaKnown RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 P4HA3Q7Z4N8 544 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 MSRB3Q8IXL7 192 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 LILRA2Q8N149 483 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 TMCO5AQ8N6Q1 288 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 OR2V1Q8NHB1 315 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 STARD4Q96DR4 205 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 AURKBQ96GD4 344 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 LURAP1Q96LR2 239 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 KLHL15Q96M94 604 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 QRSL1Q9H0R6 528 aaKnown RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 PIGMQ9H3S5 423 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 COQ10BQ9H8M1 238 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 MCCC2Q9HCC0 563 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 EXOSC3Q9NQT5 275 aaKnown RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 PAQR5Q9NXK6 330 aaPredicted RBP10.04□□□□□ -0.8
SMAD4-211ENST00000590499 SLC25A37Q9NYZ2 338 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 STOML1Q9UBI4 398 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 PACSIN3Q9UKS6 424 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 SLC35A3Q9Y2D2 325 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 PCDHB14Q9Y5E9 798 aa10.04□□□□□ -0.8
SMAD4-211ENST00000590499 A0A096LPI6 279 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 TRBV5-3A0A0A0MS03 114 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 CLDN24A6NM45 220 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 A8MXE2 369 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 TNFSF11O14788 317 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 CXCL13O43927 109 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 NUDT14O95848 222 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 CGAP01215 116 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 TFPTP0C1Z6 253 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 FCGR2AP12318 317 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 ETFAP13804 333 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 ME2P23368 584 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 PEX19P40855 299 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 CCR4P51679 360 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 KCNJ10P78508 379 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 SORDQ00796 357 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 SELENBP1Q13228 472 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 SNTB1Q13884 538 aaKnown RBP10.03□□□□□ -0.8
SMAD4-211ENST00000590499 SQLEQ14534 574 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 C6orf10Q5SRN2 563 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 VWA1Q6PCB0 445 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 HMGN2P46Q86SG4 172 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 CMIPQ8IY22 773 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 RFWD2Q8NHY2 731 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 UBASH3BQ8TF42 649 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 ST8SIA1Q92185 356 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 PMM1Q92871 262 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 SPDL1Q96EA4 605 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 LRRC46Q96FV0 321 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 THUMPD3Q9BV44 507 aaKnown RBP10.03□□□□□ -0.8
SMAD4-211ENST00000590499 CRIM1Q9NZV1 1036 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 CCDC167Q9P0B6 97 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 GMEB1Q9Y692 573 aa10.03□□□□□ -0.8
SMAD4-211ENST00000590499 FAM221AA4D161 298 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 KIAA1324LA8MWY0 1029 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-211ENST00000590499 NR5A2O00482 541 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 ANP32DO95626 131 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 NR2F1P10589 423 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 SFTPDP35247 375 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 KIR2DL3P43628 341 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 PCYT1AP49585 367 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 GP2P55259 537 aaKnown RBP10.02□□□□□ -0.81
SMAD4-211ENST00000590499 SESN3P58005 492 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 DSTNP60981 165 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 RGNQ15493 299 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 SGCBQ16585 318 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 PAGE3Q5JUK9 113 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 HBMQ6B0K9 141 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 LUZP2Q86TE4 346 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 SLC38A5Q8WUX1 472 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 CNOT9Q92600 299 aaKnown RBP10.02□□□□□ -0.81
SMAD4-211ENST00000590499 THOC1Q96FV9 657 aaKnown RBP10.02□□□□□ -0.81
SMAD4-211ENST00000590499 ZNF559Q9BR84 538 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 SIKE1Q9BRV8 207 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 RBM24Q9BX46 236 aaKnown RBP10.02□□□□□ -0.81
SMAD4-211ENST00000590499 SRXN1Q9BYN0 137 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 MTHFD2LQ9H903 347 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-211ENST00000590499 NPHS2Q9NP85 383 aa10.02□□□□□ -0.81
SMAD4-211ENST00000590499 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.02□□□□□ -0.81
SMAD4-211ENST00000590499 ACER3Q9NUN7 267 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms