RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 OR2AJ1Q8NGZ0 328 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 RASD2Q96D21 266 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 Q96M85 177 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 LMF1Q96S06 567 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 PHF7Q9BWX1 381 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-208ENST00000589797 MROQ9BYG7 248 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 NYNRINQ9P2P1 1898 aaKnown RBP13.5□□□□□ -0.25
RETREG3-208ENST00000589797 SPTY2D1-AS1A0A0U1RR47 76 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 A0A1W2PQF6 199 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF879B4DU55 563 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 LILRB5O75023 590 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 GPX5O75715 221 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 PAHP00439 452 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 OR8G3PP0DMU2 310 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 PGCP20142 388 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 PTPN6P29350 595 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 TRHRP34981 398 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-208ENST00000589797 SOX18P35713 384 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 STEAP3Q658P3 488 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 BICRALQ6AI39 1079 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 MBOAT2Q6ZWT7 520 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 TMED4Q7Z7H5 227 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 OR8H1Q8NGG4 311 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 OR6C1Q96RD1 312 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 ANKRD10Q9NXR5 420 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 RASD1Q9Y272 281 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 SLC22A7Q9Y694 548 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 A0A1W2PPV9 198 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 ZNF749O43361 778 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 JMJD7P0C870 316 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 TACR3P29371 465 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 HNRNPFP52597 415 aaKnown RBP13.5□□□□□ -0.25
RETREG3-208ENST00000589797 FOXK2Q01167 660 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 NRARPQ7Z6K4 114 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 RBP7Q96R05 134 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 WDR77Q9BQA1 342 aaPredicted RBP13.5□□□□□ -0.25
RETREG3-208ENST00000589797 UBQLN4Q9NRR5 601 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 BABAM2Q9NXR7 383 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 ING4Q9UNL4 249 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 SLC6A5Q9Y345 797 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 VWA8A3KMH1 1905 aa13.5□□□□□ -0.25
RETREG3-208ENST00000589797 TMEM72A0PK05 275 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 INMT-MINDY4F8WBC2 141 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 UPK1BO75841 260 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 PLATP00750 562 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 SLC35E2P0CK97 266 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 GBX1Q14549 363 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 SCGB2B2Q4G0G5 96 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 LYSMD4Q5XG99 296 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 Q7L0L9 218 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 ORAI1Q96D31 301 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 GINS4Q9BRT9 223 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 FSCN3Q9NQT6 498 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 SIRT3Q9NTG7 399 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 TXNL4BQ9NX01 149 aaKnown RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 HS3ST3A1Q9Y663 406 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 UBE2QL1A1L167 161 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 ZAR1LA6NP61 321 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 KDM4EB2RXH2 506 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 CPNE6O95741 557 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 CD3GP09693 182 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 MEPCEQ7L2J0 689 aaKnown RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 MARCH3Q86UD3 253 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 C8orf44Q96CB5 159 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 ORAI3Q9BRQ5 295 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 NT5DC2Q9H857 520 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 FARSAQ9Y285 508 aaKnown RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 DCDC2BA2VCK2 349 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 MEIS3P1A6NDR6 274 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 SLC16A7O60669 478 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 IFNA6P05013 189 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 NID1P14543 1247 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 CD27P26842 260 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 RACK1P63244 317 aaKnown RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 MAPK14Q16539 360 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 RAET1LQ5VY80 246 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 RASSF6Q6ZTQ3 369 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 OR4C3Q8NH37 302 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 C16orf52Q8NHV5 167 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 OR2A5Q96R48 311 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 CMKLR1Q99788 373 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 PDCD1LG2Q9BQ51 273 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 WFDC6Q9BQY6 131 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 LRRC61Q9BV99 259 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 NUFIP1Q9UHK0 495 aaKnown RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 A4GNTQ9UNA3 340 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 C19orf53Q9UNZ5 99 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 C5orf67F2Z3F1 127 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 CTNSO60931 367 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 JUNBP17275 347 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 RAB3BP20337 219 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 HSD11B1P28845 292 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 INSL4Q14641 139 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 OR7A5Q15622 319 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 C16orf47Q6ZP98 133 aaPredicted RBP13.49□□□□□ -0.25
RETREG3-208ENST00000589797 ACACAQ13085 2346 aa13.49□□□□□ -0.25
RETREG3-208ENST00000589797 FFAR1O14842 300 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 KCNK2O95069 426 aa13.48□□□□□ -0.25
RETREG3-208ENST00000589797 AFF3P51826 1226 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms