RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 FCMRO60667 390 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 SCN2BO60939 215 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 GCM2O75603 506 aaPredicted RBP12.77□□□□□ -0.37
MBD1-220ENST00000589758 SLC22A3O75751 556 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 CYP7B1O75881 506 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 ENPP1P22413 925 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 IL32P24001 234 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 SESN3P58005 492 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 STX1BP61266 288 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 LTBQ06643 244 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 P2RY6Q15077 328 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 SFRP5Q5T4F7 317 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 AP1ARQ63HQ0 302 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 CLEC9AQ6UXN8 241 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 YTHDF3Q7Z739 585 aaKnown RBP12.77□□□□□ -0.37
MBD1-220ENST00000589758 MIER2Q8N344 545 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 OR9I1Q8NGQ6 314 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 SLC25A43Q8WUT9 341 aaPredicted RBP12.77□□□□□ -0.37
MBD1-220ENST00000589758 TMEM171Q8WVE6 324 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 XAGE5Q8WWM1 108 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 S100PBPQ96BU1 408 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 PERPQ96FX8 193 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 OR52E6Q96RD3 313 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 CXorf56Q9H5V9 222 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 ACER3Q9NUN7 267 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 FGFR1OP2Q9NVK5 253 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 KCNE5Q9UJ90 142 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 SLC35A3Q9Y2D2 325 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 WDR45Q9Y484 360 aa12.77□□□□□ -0.37
MBD1-220ENST00000589758 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.37
MBD1-220ENST00000589758 HEATR5AQ86XA9 2040 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 A0A0G2JND7 137 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 HS3ST1O14792 307 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 KIAA0513O60268 411 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 PGRP06401 933 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 UBTFL6P0CB48 400 aaPredicted RBP12.76□□□□□ -0.37
MBD1-220ENST00000589758 OR12D1P0DN82 309 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 PAX1P15863 534 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 MDH1P40925 334 aaKnown RBP12.76□□□□□ -0.37
MBD1-220ENST00000589758 APOBEC1P41238 236 aaKnown RBP12.76□□□□□ -0.37
MBD1-220ENST00000589758 OR3A2P47893 321 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 PTH2RP49190 550 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 CASP9P55211 416 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 CSNK2A1P68400 391 aaPredicted RBP12.76□□□□□ -0.37
MBD1-220ENST00000589758 ITGADQ13349 1161 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 SAXO2Q658L1 398 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 ZNF619Q8N2I2 560 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 ZNF611Q8N823 705 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 HSD17B8Q92506 261 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 KISS1RQ969F8 398 aaPredicted RBP12.76□□□□□ -0.37
MBD1-220ENST00000589758 ROPN1LQ96C74 230 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 COX4I2Q96KJ9 171 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 Q96MF0 132 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 OR5B2Q96R09 309 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 SMR3AQ99954 134 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 PSD2Q9BQI7 771 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 SAP130Q9H0E3 1048 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 SDR39U1Q9NRG7 319 aaPredicted RBP12.76□□□□□ -0.37
MBD1-220ENST00000589758 ZIM2Q9NZV7 527 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 SPIN1Q9Y657 262 aaPredicted RBP12.76□□□□□ -0.37
MBD1-220ENST00000589758 ACANP16112 2415 aa12.76□□□□□ -0.37
MBD1-220ENST00000589758 NF1P21359 2839 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 IGHV3-15A0A0B4J1V0 119 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 DYNC1I1O14576 645 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 CYTIPO60759 359 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 PLAUP00749 431 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 ADAP00813 363 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 GSNP06396 782 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 HEXAP06865 529 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 NCF2P19878 526 aaPredicted RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 FKBP2P26885 142 aaKnown RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 CHI3L1P36222 383 aaPredicted RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 PGM1P36871 562 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 KHKP50053 298 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 POLR2JP52435 117 aaKnown RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 TXNL4AP83876 142 aaKnown RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 LRRC74AQ0VAA2 488 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 RASGEF1BQ0VAM2 473 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 MERTKQ12866 999 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 TYW3Q6IPR3 259 aaKnown RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 ADAM5Q6NVV9 412 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 TNFAIP8L2Q6P589 184 aaPredicted RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 TMPPEQ6ZT21 453 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 SSX8Q7RTT4 187 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 TRIML2Q8N7C3 387 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 GLB1L3Q8NCI6 653 aaPredicted RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 FAM71CQ8NEG0 241 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 ZNF563Q8TA94 476 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 IGFBPL1Q8WX77 278 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 RAB8BQ92930 207 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 ZNF524Q96C55 264 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 NEURL3Q96EH8 262 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 PANX1Q96RD7 426 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 INPP5KQ9BT40 448 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 QRSL1Q9H0R6 528 aaKnown RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 ESRP2Q9H6T0 727 aaKnown RBP12.75□□□□□ -0.37
MBD1-220ENST00000589758 BTNL2Q9UIR0 455 aa12.75□□□□□ -0.37
MBD1-220ENST00000589758 ZNF814B7Z6K7 855 aa12.74□□□□□ -0.37
MBD1-220ENST00000589758 H7C1Q1 480 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms