RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 WDR70Q9NW82 654 aa6.62□□□□□ -1.35
SPIDR-228ENST00000588781 MRPL39Q9NYK5 338 aaKnown RBP6.62□□□□□ -1.35
SPIDR-228ENST00000588781 STMN3Q9NZ72 180 aa6.62□□□□□ -1.35
SPIDR-228ENST00000588781 USP36Q9P275 1121 aaKnown RBP6.62□□□□□ -1.35
SPIDR-228ENST00000588781 COPZ2Q9P299 210 aa6.62□□□□□ -1.35
SPIDR-228ENST00000588781 SERTAD3Q9UJW9 196 aa6.62□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF337Q9Y3M9 751 aa6.62□□□□□ -1.35
SPIDR-228ENST00000588781 OR10H1Q9Y4A9 318 aa6.62□□□□□ -1.35
SPIDR-228ENST00000588781 NINQ8N4C6 2090 aa6.62□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF318Q5VUA4 2279 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 DCHS1Q96JQ0 3298 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SPTY2D1-AS1A0A0U1RR47 76 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF860A6NHJ4 632 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 LILRA5A6NI73 299 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 HSPB2A8KAH6 182 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 B4DXG7 233 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 J3QLW9 94 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PEX12O00623 359 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SCAMP1O15126 338 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ARPC3O15145 178 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 LINC01565O15544 149 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 LDB3O75112 727 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF217O75362 1048 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 RDH16O75452 317 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SNAPC5O75971 98 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF432O94892 652 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PPP1R3DO95685 299 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CBX7O95931 251 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 TACSTD2P09758 323 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZGLP1P0C6A0 271 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 GKN3PP0CG01 181 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 THEGLP0DJG4 465 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 APEHP13798 732 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 HPGDP15428 266 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF19P17023 458 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 GABRG2P18507 467 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 RAB3BP20337 219 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 NPR2P20594 1047 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 TBXA2RP21731 343 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 HOXD12P35452 270 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SOX18P35713 384 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 GRK6P43250 576 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SLC6A8P48029 635 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PITPNBP48739 271 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CLDN20P56880 219 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 DCAF7P61962 342 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 IGLV3-21P80748 117 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 LSM11P83369 360 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ID2Q02363 134 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CRYZQ08257 329 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CCINQ13939 588 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 GGTLC2Q14390 218 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 EXOSC7Q15024 291 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PON3Q15166 354 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ELOCQ15369 112 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 HSPB2Q16082 182 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PRTGQ2VWP7 1150 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 IDNKQ5T6J7 187 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SLC6A19Q695T7 634 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 RPL22L1Q6P5R6 122 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ARL9Q6T311 187 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 OVCH1Q7RTY7 1134 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 NUP54Q7Z3B4 507 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 FAM220AQ7Z4H9 259 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CEACAM19Q7Z692 300 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 NOXA1Q86UR1 476 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PARGQ86W56 976 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 MEX3DQ86XN8 651 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CARFQ8N187 725 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SIRT6Q8N6T7 355 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 TMEM99Q8N816 258 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZFP41Q8N8Y5 198 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 BBS1Q8NFJ9 593 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 OR13H1Q8NG92 308 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 OR13C2Q8NGS9 318 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CCL4L1Q8NHW4 92 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 RPLP0P6Q8NHW5 317 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ABHD4Q8TB40 342 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 GRHL3Q8TE85 626 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CNOT9Q92600 299 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ART5Q96L15 291 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ERMAPQ96PL5 475 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF649Q9BS31 505 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF426Q9BUY5 554 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 CHRNA10Q9GZZ6 450 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 SLITRK2Q9H156 845 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 MIR1-1HGQ9H1L0 117 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PCED1AQ9H1Q7 454 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 C12orf10Q9HB07 376 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 EXOSC3Q9NQT5 275 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ZNF275Q9NSD4 429 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 DNAJB12Q9NXW2 375 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PTTG3PQ9NZH4 202 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 EXTL2Q9UBQ6 330 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 ICAM5Q9UMF0 924 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 NDRG2Q9UN36 371 aaKnown RBP6.61□□□□□ -1.35
SPIDR-228ENST00000588781 PLCL2Q9UPR0 1127 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 MOKQ9UQ07 419 aa6.61□□□□□ -1.35
SPIDR-228ENST00000588781 NTNG1Q9Y2I2 539 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms