RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TRIM64CA6NLI5 447 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 EFCAB9A8MZ26 197 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 M0R129 80 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GNB5O14775 395 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 XPNPEP2O43895 674 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GMFGO60234 142 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 MAN1A2O60476 641 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SAGP10523 405 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GP1BBP13224 206 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TACR3P29371 465 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SMSP52788 366 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 CDK5Q00535 292 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 NHLH1Q02575 133 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 ATP1A4Q13733 1029 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GINS1Q14691 196 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 QPRTQ15274 297 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TOMM34Q15785 309 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 BICRALQ6AI39 1079 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 FCRLBQ6BAA4 426 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 RPL13AP3Q6NVV1 102 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 H3F3CQ6NXT2 135 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SLC27A4Q6P1M0 643 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TMEM81Q6P7N7 255 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 P3H2Q8IVL5 708 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 CCDC103Q8IW40 242 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 BPIFB6Q8NFQ5 453 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 BRIX1Q8TDN6 353 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GPR119Q8TDV5 335 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 DUSP19Q8WTR2 217 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 ASB15Q8WXK1 588 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 OSTF1Q92882 214 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 UBE2FQ969M7 185 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 KIAA1143Q96AT1 154 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 ZNF524Q96C55 264 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 IP6K3Q96PC2 410 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SECISBP2Q96T21 854 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TMEM43Q9BTV4 400 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 POLDIP3Q9BY77 421 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 ADAM19Q9H013 955 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 OR52D1Q9H346 318 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GPN2Q9H9Y4 310 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TAS2R10Q9NYW0 307 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 PPP4R1LQ9P1A2 415 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 IL17BQ9UHF5 180 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 WIF1Q9Y5W5 379 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 CHCHD2Q9Y6H1 151 aaPredicted RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 RIF1Q5UIP0 2472 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 AHCTF1Q8WYP5 2266 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 KNTC1P50748 2209 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 HTR3EA5X5Y0 456 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 A6NHS1 94 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 FAM20BO75063 409 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 DXOO77932 396 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 RCBTB2O95199 551 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 IGF2P01344 180 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 LIPCP11150 499 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 FUT1P19526 365 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 EEF1B2P24534 225 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 CASP3P42574 277 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GIPRP48546 466 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SNRPGP62308 76 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SMN1Q16637 294 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 PGGHGQ32M88 737 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 ZNF773Q6PK81 442 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 IL20RBQ6UXL0 311 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 PTCHD4Q6ZW05 846 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 GRINAQ7Z429 371 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 OR52L1Q8NGH7 329 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 OR8J1Q8NGP2 316 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 OR13C2Q8NGS9 318 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TRUB1Q8WWH5 349 aaKnown RBP10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SGTBQ96EQ0 304 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TSSK6Q9BXA6 273 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 PRRG3Q9BZD7 231 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 CPNE5Q9HCH3 593 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 HHATLQ9HCP6 504 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SDHAF3Q9NRP4 125 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 SCN3BQ9NY72 215 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 DLL3Q9NYJ7 618 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TVP23BQ9NYZ1 205 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 OSGIN1Q9UJX0 560 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 TPRKBQ9Y3C4 175 aa10.39□□□□□ -0.75
SMAD4-205ENST00000588745 B4DXG7 233 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 HCN1O60741 890 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 TFAP2AP05549 437 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 CXCR1P25024 350 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 MSX1P28360 303 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 HTR3AP46098 478 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 RPL5P46777 297 aaKnown RBP10.38□□□□□ -0.75
SMAD4-205ENST00000588745 SLC9A3P48764 834 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 PCYT1AP49585 367 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 POLR2HP52434 150 aaKnown RBP10.38□□□□□ -0.75
SMAD4-205ENST00000588745 NR1H2P55055 460 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 DLX5P56178 289 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 FXYD6P3P58550 94 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 CSNK2BP67870 215 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 SNTA1Q13424 505 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 CLEC12AQ5QGZ9 265 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 TMEM201Q5SNT2 666 aa10.38□□□□□ -0.75
SMAD4-205ENST00000588745 OR5M10Q6IEU7 315 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms