RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CTU2Q2VPK5 515 aaKnown RBP23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 DPH1Q9BZG8 443 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 PROK2Q9HC23 129 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 SDHAF3Q9NRP4 125 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 MED11Q9P086 117 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 PPP4R1LQ9P1A2 415 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 EIF4E1BA6NMX2 242 aaKnown RBP23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 H3BN98 237 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 CDC40O60508 579 aaKnown RBP eCLIP23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 WT1P19544 449 aaPredicted RBP23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 POU1F1P28069 291 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 MSX1P28360 303 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 TPD52P55327 224 aaPredicted RBP23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 PRAMEF20Q5VT98 475 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 TMEM236Q5W0B7 351 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 SLC30A6Q6NXT4 461 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 BEST3Q8N1M1 668 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 SGCZQ96LD1 299 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 APOL4Q9BPW4 351 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 ANGPTL4Q9BY76 406 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 PLA2G12AQ9BZM1 189 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 SLC19A3Q9BZV2 496 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 LHPPQ9H008 270 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 EGLN3Q9H6Z9 239 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 TAS2R10Q9NYW0 307 aa23.68■■□□□ 1.38
SCAMP4-210ENST00000588555 EML6Q6ZMW3 1958 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 MED13Q9UHV7 2174 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 ELOA3DA6NLF2 546 aaPredicted RBP23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 TNFAIP8O95379 198 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 GP1BBP13224 206 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 INPP5JQ15735 1006 aaPredicted RBP23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 ELOA3BQ3SY89 546 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 LAIR2Q6ISS4 152 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 ELOA3Q8NG57 546 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 TMEM43Q9BTV4 400 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 ING2Q9H160 280 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 OSGIN1Q9UJX0 560 aa23.67■■□□□ 1.38
SCAMP4-210ENST00000588555 ENO4A6NNW6 628 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 FUT1P19526 365 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 DLX5P56178 289 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 NUP107P57740 925 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 IL5RAQ01344 420 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 CRYZQ08257 329 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 SLC22A10Q63ZE4 541 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 ZNF620Q6ZNG0 422 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 MDGA2Q7Z553 956 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 ZNF786Q8N393 782 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 WDSUB1Q8N9V3 476 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 CLEC1AQ8NC01 280 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 OR8D4Q8NGM9 314 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 UBE2FQ969M7 185 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 ZNF696Q9H7X3 374 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 WDR70Q9NW82 654 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 IL20Q9NYY1 176 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 CPAMD8Q8IZJ3 1885 aa23.66■■□□□ 1.38
SCAMP4-210ENST00000588555 ITGA3P26006 1051 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 ELK4P28324 431 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 HLCSP50747 726 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 EGR4Q05215 589 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 FOXC1Q12948 553 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 SLX4IPQ5VYV7 408 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 RTL4Q6ZR62 310 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 ZNF227Q86WZ6 799 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 ENTHD1Q8IYW4 607 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 CDK20Q8IZL9 346 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 CYP4Z2PQ8N1L4 340 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 FADS6Q8N9I5 356 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 FAM81AQ8TBF8 368 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 ANKRD10Q9NXR5 420 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 ANKRD33BA6NCL7 494 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 ETV2O00321 342 aaPredicted RBP23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 NKX2-8O15522 239 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 IGF2P01344 180 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 MAD2L1BPQ15013 274 aaPredicted RBP23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 GRINAQ7Z429 371 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 GPALPP1Q8IXQ4 340 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 CLDN22Q8N7P3 220 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 OR2M3Q8NG83 312 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 THAP4Q8WY91 577 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 ST8SIA1Q92185 356 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 HHATLQ9HCP6 504 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 STMN3Q9NZ72 180 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 TEKT2Q9UIF3 430 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 WASF3Q9UPY6 502 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 RNF6Q9Y252 685 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 MYRFQ9Y2G1 1151 aa23.65■■□□□ 1.38
SCAMP4-210ENST00000588555 UNC119BA6NIH7 251 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 PRKCAP17252 672 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 FXYD6P3P58550 94 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 CDK5Q00535 292 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 C12orf73Q69YU5 71 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 ARSKQ6UWY0 536 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 AASSQ9UDR5 926 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 CDH10Q9Y6N8 788 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 MPDZO75970 2070 aa23.64■■□□□ 1.37
SCAMP4-210ENST00000588555 GIPRP48546 466 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 POLR2HP52434 150 aaKnown RBP23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 CDK5R2Q13319 367 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 BROXQ5VW32 411 aa23.63■■□□□ 1.37
SCAMP4-210ENST00000588555 CNIH3Q8TBE1 160 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms