RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 PKNOX2Q96KN3 472 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 TRAF4Q9BUZ4 470 aaPredicted RBP12.12□□□□□ -0.47
HDAC5-208ENST00000588419 LAT2Q9GZY6 243 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 FAIMQ9NVQ4 179 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 EMC3Q9P0I2 261 aa12.12□□□□□ -0.47
HDAC5-208ENST00000588419 ING1Q9UK53 422 aaPredicted RBP12.12□□□□□ -0.47
HDAC5-208ENST00000588419 NOSIPQ9Y314 301 aaKnown RBP12.12□□□□□ -0.47
HDAC5-208ENST00000588419 ALPK2Q86TB3 2170 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 WDR91A4D1P6 747 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 DUXAA6NLW8 204 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 ESPNB1AK53 854 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 SHISA9B4DS77 424 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 FCMRO60667 390 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 UGT2B17O75795 530 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 AK1P00568 194 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 OR12D1P0DN82 309 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 CSNK2A1P68400 391 aaPredicted RBP12.11□□□□□ -0.47
HDAC5-208ENST00000588419 HPCAP84074 193 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 MAD2L1Q13257 205 aaPredicted RBP12.11□□□□□ -0.47
HDAC5-208ENST00000588419 SLC25A53Q5H9E4 307 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 ATAD3BQ5T9A4 648 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 C9orf135Q5VTT2 229 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 HEPHL1Q6MZM0 1159 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 HMBOX1Q6NT76 420 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 SLC22A25Q6T423 547 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 HOMEZQ8IX15 550 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 RIBC1Q8N443 379 aaPredicted RBP12.11□□□□□ -0.47
HDAC5-208ENST00000588419 ST8SIA1Q92185 356 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 RAB8BQ92930 207 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 ZHX1-C8orf76Q96EF9 292 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 CACNG6Q9BXT2 260 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 NMUR2Q9GZQ4 415 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 CTPS2Q9NRF8 586 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 EXD2Q9NVH0 621 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 NOP53Q9NZM5 478 aaKnown RBP12.11□□□□□ -0.47
HDAC5-208ENST00000588419 KCNE5Q9UJ90 142 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
HDAC5-208ENST00000588419 SPIN1Q9Y657 262 aaPredicted RBP12.11□□□□□ -0.47
HDAC5-208ENST00000588419 ZNF724A8MTY0 619 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 M0R1B8 84 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 BCAS1O75363 584 aaPredicted RBP12.1□□□□□ -0.47
HDAC5-208ENST00000588419 CREB1P16220 341 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 COX5AP20674 150 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 SERPINB5P36952 375 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 ZNF141Q15928 474 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 ARHGAP11BQ3KRB8 267 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 GPAT3Q53EU6 434 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 TIMM23BQ5SRD1 257 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 AGAP6Q5VW22 663 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 ABLIM2Q6H8Q1 611 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 TMPPEQ6ZT21 453 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 EIF3MQ7L2H7 374 aaKnown RBP12.1□□□□□ -0.47
HDAC5-208ENST00000588419 RIMKLAQ8IXN7 391 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 EIF1ADQ8N9N8 165 aaKnown RBP12.1□□□□□ -0.47
HDAC5-208ENST00000588419 XAGE5Q8WWM1 108 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 APH1AQ96BI3 265 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 USB1Q9BQ65 265 aaKnown RBP12.1□□□□□ -0.47
HDAC5-208ENST00000588419 C1QTNF6Q9BXI9 259 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 DPY30Q9C005 99 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 ZNF350Q9GZX5 532 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 BARX1Q9HBU1 254 aaPredicted RBP12.1□□□□□ -0.47
HDAC5-208ENST00000588419 B3GALT5Q9Y2C3 310 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 WDR45Q9Y484 360 aa12.1□□□□□ -0.47
HDAC5-208ENST00000588419 PLCE1Q9P212 2302 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 IGHV4-30-2A0A087WSY4 118 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 OR5H1A6NKK0 313 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 RNF212BA8MTL3 300 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 CD5LO43866 347 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 KIAA0513O60268 411 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 CD8AP01732 235 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 BPGMP07738 259 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 CHI3L1P36222 383 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-208ENST00000588419 KHKP50053 298 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 CLDN8P56748 225 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 OR2B6P58173 313 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 MAPK14Q16539 360 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 TMEM108Q6UXF1 575 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 CASP12Q6UXS9 341 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 ZNF433Q8N7K0 673 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-208ENST00000588419 SLC25A43Q8WUT9 341 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-208ENST00000588419 ZNF75CPQ92670 426 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-208ENST00000588419 TRIM44Q96DX7 344 aaPredicted RBP12.09□□□□□ -0.47
HDAC5-208ENST00000588419 ADAD1Q96M93 576 aaKnown RBP12.09□□□□□ -0.47
HDAC5-208ENST00000588419 RHNO1Q9BSD3 238 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 OR11A1Q9GZK7 315 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 ACER3Q9NUN7 267 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 CHRNA9Q9UGM1 479 aa12.09□□□□□ -0.47
HDAC5-208ENST00000588419 CLDN24A6NM45 220 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 RNASET2O00584 256 aaKnown RBP12.08□□□□□ -0.48
HDAC5-208ENST00000588419 ITM2AO43736 263 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 PGM1P36871 562 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 NME5P56597 212 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 IRX1P78414 480 aaPredicted RBP12.08□□□□□ -0.48
HDAC5-208ENST00000588419 EMX2Q04743 252 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 CHI3L2Q15782 390 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 NRF1Q16656 503 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 FBXW9Q5XUX1 488 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 TYW3Q6IPR3 259 aaKnown RBP12.08□□□□□ -0.48
HDAC5-208ENST00000588419 KLHL17Q6TDP4 642 aa12.08□□□□□ -0.48
HDAC5-208ENST00000588419 CLEC2AQ6UVW9 174 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms