RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 CNOT9Q92600 299 aaKnown RBP17.44■□□□□ 0.38
TPM4-208ENST00000588410 PIK3IP1Q96FE7 263 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 FOXC2Q99958 501 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 CCDC28BQ9BUN5 200 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 PLEKHF2Q9H8W4 249 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 CTPS2Q9NRF8 586 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 SLC6A13Q9NSD5 602 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 THUMPD1Q9NXG2 353 aaKnown RBP17.44■□□□□ 0.38
TPM4-208ENST00000588410 KLHL9Q9P2J3 617 aa17.44■□□□□ 0.38
TPM4-208ENST00000588410 SULT2B1O00204 365 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 YES1P07947 543 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 ETFAP13804 333 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 NID1P14543 1247 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 CRYGSP22914 178 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 HTR3AP46098 478 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 IDH2P48735 452 aaKnown RBP17.43■□□□□ 0.38
TPM4-208ENST00000588410 CRISP3P54108 245 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 PPP2R2AP63151 447 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 GTDC1Q4AE62 458 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 TMPPEQ6ZT21 453 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 CCDC106Q9BWC9 280 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 RAD21L1Q9H4I0 556 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 CHRNA9Q9UGM1 479 aa17.43■□□□□ 0.38
TPM4-208ENST00000588410 CCDC168Q8NDH2 2452 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 BCHEP06276 602 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 FKBP2P26885 142 aaKnown RBP17.42■□□□□ 0.38
TPM4-208ENST00000588410 DIO1P49895 249 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 LIN52Q52LA3 116 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 SLC2A7Q6PXP3 512 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 STAC2Q6ZMT1 411 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 NUFIP2Q7Z417 695 aaKnown RBP17.42■□□□□ 0.38
TPM4-208ENST00000588410 OR52P1PQ8NH57 321 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 ZHX1-C8orf76Q96EF9 292 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 AURKBQ96GD4 344 aaPredicted RBP17.42■□□□□ 0.38
TPM4-208ENST00000588410 EBF4Q9BQW3 602 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 GPR52Q9Y2T5 361 aa17.42■□□□□ 0.38
TPM4-208ENST00000588410 CFAP73A6NFT4 308 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 FESP07332 822 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 H2AFXP16104 143 aaPredicted RBP17.41■□□□□ 0.38
TPM4-208ENST00000588410 CCNA2P20248 432 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 RPS4Y1P22090 263 aaKnown RBP17.41■□□□□ 0.38
TPM4-208ENST00000588410 MRPL19P49406 292 aaKnown RBP17.41■□□□□ 0.38
TPM4-208ENST00000588410 MVDP53602 400 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 RASGEF1BQ0VAM2 473 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 MRPL2Q5T653 305 aaKnown RBP17.41■□□□□ 0.38
TPM4-208ENST00000588410 ZNF440Q8IYI8 595 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 GTF2H4Q92759 462 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 HDHD5Q9BXW7 423 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 ACTR6Q9GZN1 396 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 PCDHB14Q9Y5E9 798 aa17.41■□□□□ 0.38
TPM4-208ENST00000588410 DEFB108AA8MXU0 73 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 CLIC1O00299 241 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 NR5A2O00482 541 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 AP3D1O14617 1153 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 SMAD9O15198 467 aaKnown RBP17.4■□□□□ 0.38
TPM4-208ENST00000588410 CYTIPO60759 359 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 ATE1O95260 518 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 TFPTP0C1Z6 253 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 CLK1P49759 484 aaKnown RBP17.4■□□□□ 0.38
TPM4-208ENST00000588410 POLR2HP52434 150 aaKnown RBP17.4■□□□□ 0.38
TPM4-208ENST00000588410 LARS2Q15031 903 aaKnown RBP17.4■□□□□ 0.38
TPM4-208ENST00000588410 TFAP2EQ6VUC0 442 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 STEAP2Q8NFT2 490 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 SLC38A5Q8WUX1 472 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 CKAP2Q8WWK9 683 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 MBD6Q96DN6 1003 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 MAGEB18Q96M61 343 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 ALPK1Q96QP1 1244 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 PSD2Q9BQI7 771 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 PAIP1Q9H074 479 aaKnown RBP17.4■□□□□ 0.38
TPM4-208ENST00000588410 OR10A4Q9H209 315 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 CXXC4Q9H2H0 198 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 ARMC7Q9H6L4 198 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 BCO1Q9HAY6 547 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 CCDC167Q9P0B6 97 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 ZNF232Q9UNY5 417 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 HDGFL3Q9Y3E1 203 aa17.4■□□□□ 0.38
TPM4-208ENST00000588410 A0A096LPI6 279 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 TMED7-TICAM2A0A0A6YYA0 188 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 A0A0G2JPF8 293 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 HNRNPCL2B2RXH8 293 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 HNRNPCL3B7ZW38 293 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 HNRNPCL1O60812 293 aaKnown RBP17.39■□□□□ 0.37
TPM4-208ENST00000588410 ADAM11O75078 769 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 HNRNPCL4P0DMR1 293 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 PSMB1P20618 241 aaKnown RBP17.39■□□□□ 0.37
TPM4-208ENST00000588410 IL32P24001 234 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 SLC1A3P43003 542 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 IRX1P78414 480 aaPredicted RBP17.39■□□□□ 0.37
TPM4-208ENST00000588410 PLAURQ03405 335 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 EPS8Q12929 822 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 RGNQ15493 299 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 MAPK11Q15759 364 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 ZSWIM7Q19AV6 140 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 DEFB113Q30KQ7 82 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 BLOC1S3Q6QNY0 202 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 MTDHQ86UE4 582 aaKnown RBP17.39■□□□□ 0.37
TPM4-208ENST00000588410 CXorf67Q86X51 503 aaPredicted RBP17.39■□□□□ 0.37
TPM4-208ENST00000588410 VRK2Q86Y07 508 aa17.39■□□□□ 0.37
TPM4-208ENST00000588410 ADGRG3Q86Y34 549 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms